Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542265.1_202016-01-
27] 137 sequences; 21,492,894 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq36 143 3e-29
seq1 91.5 2e-13
>seq36
Length=702765
Score = 143 bits (158), Expect = 3e-29
Identities = 485/746 (65%), Gaps = 17/746 (2%)
Strand=Plus/Plus
Query 111348 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAA 111407
||||| |||||||||||||||||| |||| | |||||||| ||| | | ||| |
Sbjct 136095 TGTTGGCGGCATCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGA 136154
Query 111408 TAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466
|| | ||| | | || | ||| || | || ||||| || |||||| |||||||
Sbjct 136155 CGGCGTACCAGAGCTTCTG-GGCGGGGATGGTGCGCTTGGCGCGACCCTCCTTCTCGTAC 136213
Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 111526
||| |||| | | ||||| || || | ||| |||||| || |||| | |
Sbjct 136214 TTTTCAAAGAGCTCCTTGAACTCGTCGCCGTAGACCTCGTGGAGACCGGGCGCCTCGGCC 136273
Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586
|| ||||| || | ||| | || | ||| || |||| |||||| ||||| || |||
Sbjct 136274 GGGCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGGATC 136333
Query 111587 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 111646
|| |||| | || | || | || |||| || | || ||||| || |
Sbjct 136334 CAAAGGGCAAAGAACAAGTCGCGCGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGG 136393
Query 111647 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTT 111706
|| |||||||| | ||| || |||||||| ||||| || |||| |||| | |||
Sbjct 136394 TCGAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCC--- 136450
Query 111707 CGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760
| ||| || | || | || |||||||| ||| ||| | ||||| |||||
Sbjct 136451 GGGCGCTTGTTGCCTCCCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATG 136510
Query 111761 GGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCA 111818
|| || || || | || | || || || || ||| ||| || | || | |
Sbjct 136511 GGGATGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAC--GAACCGGTCGCGCGGA 136568
Query 111819 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 111878
| ||||| | || || || || ||| ||| ||||| |||| ||| | | |
Sbjct 136569 TGTTGTGGATCGAGAGGCCGATGCCGCCTGCCGTCTTGGAGATGAGCGCGCACGTCTTGA 136628
Query 111879 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 111938
| || | ||||| || | ||| ||||| ||||| | | || |||||||| || |
Sbjct 136629 GCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCACGACGAGA 136688
Query 111939 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC-T 111997
|||||| || || || || |||||||| || || | ||||| | || ||||
Sbjct 136689 GCTGCGGGTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGT-AAAGTACCGC 136747
Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057
| ||||| || ||| ||||| | | |||||||| || |||||||||||||
Sbjct 136748 TCCGACATGAGGTTGTACGTCTCGATCGCGCGGTCAATGTCGTCGCCGTGGATGCCGACC 136807
Query 112058 GCGACCCGCATGAACATGTACTGTGG 112083
||||| ||||||| ||||| ||| ||
Sbjct 136808 GCGACGCGCATGAGCATGTGCTGCGG 136833
>seq1
Length=2201887
Score = 91.5 bits (100), Expect = 2e-13
Identities = 165/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 11620 CTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATT-TTCGCGGGCGA 11678
||| || | ||| |||||||| || ||||||| || || || || ||| || |
Sbjct 260690 CTTTCCGATCGCGTCAATCTCGTCGATGAAGATGATGCACGGCGCGTTCTTCTTGGCCTG 260749
Query 11679 TTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG 11738
| ||| || ||||| || | ||||||| ||||| || |||||||| || || | |
Sbjct 260750 GGTGAAA-AGGTCGCGGACACGACTGGCACCGACACCGACGAACATCTCGACGAACTCGG 260808
Query 11739 CGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGG 11797
| | ||| || | || ||| ||||| | ||| || ||| | ||| |||||||||
Sbjct 260809 AGCCGGAG-ACGGAGAGGAAGGGGACGCCGGCTTCGCCTGCGGTCGCTTTGGCGAGGAGC 260867
Query 11798 GTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
||||| || ||||| || || | ||| | |||||| || ||||||||||||||
Sbjct 260868 GTCTTGCCGGTACCGGGAGGGCCGGAGAGGATGGCGCCGCGAGGGATCTTGGCACC 260923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030924495200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |