Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542265.1_202016-01- 27] 137 sequences; 21,492,894 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 >seq3 Length=1053226 Score = 127 bits (140), Expect = 2e-24 Identities = 148/197 (75%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 30033 ACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAA 30092 |||| || || ||||||| ||| ||| |||||| ||||| ||||| | | ||| | | Sbjct 241820 ACCCATAGACTGGTCCCAAGTCACCCACTTCCCGGTGCTGCAAGCCTCGCGAGTCGAGGA 241879 Query 30093 AGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGT 30152 | |||| | |||||| ||||||||||||| || |||||||| | ||| | || |||| Sbjct 241880 ACTCTCGGCTGCCGTTGCCGTCCCAGATCTTGACGCCCTTCTCCGCCAGCACCTTCGAGT 241939 Query 30153 TTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 30211 ||| | ||||| ||||||||||| ||||||||| | || | | | | ||||| | | Sbjct 241940 CCGTGCATCCCTC-GACGAACCACAACAGCTCCTCAATGATGCCGCGCGAGAAGACACGC 241998 Query 30212 TTGGTCGTGAGGAGGGG 30228 |||||||| ||||| || Sbjct 241999 TTGGTCGTCAGGAGCGG 242015 Score = 98.7 bits (108), Expect = 8e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 29629 CCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAG 29688 || ||||||||| || | ||||| || |||||||| ||||||||||| || || || || Sbjct 241259 CCGCTCGAGCTGCGTCTTGAGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCCGAG 241318 Query 29689 GGTGTGGACAAACTC-TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGA 29747 | ||| ||||| | || || | ||| |||| |||| ||||||| ||| | || Sbjct 241319 CTGGAGGATGAACTCGTGTGGGATCGTG-TCGGAGACGAGAGCGATCATGTGCGTCAAGA 241377 Query 29748 GAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGA 29807 | | || ||||||||| |||||||| ||||| || | ||| | || | |||||| | Sbjct 241378 GCGCATACGAGGCGATGTTGAAGGGCACGCCGAGGCCGAGGTCGGCGGAGCGCTGGTACA 241437 Query 29808 GCTGGCACGAGAG 29820 |||| ||||| Sbjct 241438 TGAGGCAGGAGAG 241450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162521834382