Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542305.1_202016-01- 27] 61 sequences; 20,750,089 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq15 87.8 2e-12 >seq15 Length=278969 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691 ||||||||||| ||||| |||| || | |||||||| || ||||| | ||| | ||| Sbjct 244516 GAAGCCGTCGAGATCGAGCAAGAATTCCTGACGGACGCCTTGCCCGTCGGCTTGATCGGC 244575 Query 50692 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG-TTGTTGCA 50750 |||||||| | | ||| | ||||||| ||||| || || ||| ||||| |||| || Sbjct 244576 ATGAACGCCACCCTCATGCGACAGTACATCGAGTTCGTCGCGGACCGATTGCTTGTCGC- 244634 Query 50751 GCT--GGGACAACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATA 50808 ||| || || || || || ||||| ||||| || |||||| | | || Sbjct 244635 GCTCGGGAACGAC--AAGCTGTACAATGCCGAGAACCCGTTCGACTTTATGGAGATGATC 244692 Query 50809 TCGTTGGAGGGCAAAACAAA 50828 ||| |||||||||| || || Sbjct 244693 TCGATGGAGGGCAAGACCAA 244712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014013401520