Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542305.1_202016-01-
27] 61 sequences; 20,750,089 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq57 87.8 2e-12
>seq57
Length=1280291
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| ||||||||||| || || ||||| || || || | || || || || ||
Sbjct 958823 AAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCTTGATCTTCGCGGGGAAG 958764
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | ||||| ||||| | ||||||||||||||||| ||||| ||| | ||
Sbjct 958763 CAGCTTGAGGACGGACGCACGCTTCAAGATTACAACATTCAAAAGGAATCGACCCTGCAC 958704
Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445
| |||||| | |||||||| ||
Sbjct 958703 CTCGTTTTGAGGTTGCGCGGTGG 958681
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||| || || || || | |
Sbjct 959825 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCG 959766
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || ||||| ||||||||||| || || ||||| ||
Sbjct 959765 GACACGATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAG 959706
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || || || || || ||| | |||||| || || | || |||||||||
Sbjct 959705 CAGCGCTTGATCTTCGCGGGGAAGCAGCTCGAGGATGGTCGTACTCTTTCGGATTACAAC 959646
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || || ||| | || | || |||| | ||||||||
Sbjct 959645 ATCCAGAAGGAGTCGACCCTTCACCTCGTGCTGCGTCTCCGCGGAGG 959599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727687958465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |