Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542305.1_202016-01- 27] 61 sequences; 20,750,089 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq59 84.2 2e-11 >seq59 Length=937750 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || || |||||||| || ||||| ||||||||||||||| || || || | || || Sbjct 936381 AGACGAAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTATAGTC-GCTGAGCGTGCG 936323 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | |||| || | ||||||||||| || |||| ||||||||| || ||| | || ||| Sbjct 936322 CCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGAATGCCCTC 936263 Query 34029 TTTGTCCATAATTTT 34043 |||||| ||| || Sbjct 936262 CTTGTCCTGAATCTT 936248 Score = 82.4 bits (90), Expect = 6e-11 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || || |||||||| || ||||| ||||||||||||||| || || || | || || Sbjct 937543 AGACGAAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTATAGTC-GCTGAGCGTGCG 937485 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | |||| || | ||||||||||| || |||| ||||||||| || ||| | || ||| Sbjct 937484 CCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGAATGCCCTC 937425 Query 34029 TTTGTCC 34035 |||||| Sbjct 937424 CTTGTCC 937418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397062104808922