Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542305.1_202016-01-
27] 61 sequences; 20,750,089 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq11 241 1e-58
>seq11
Length=389204
Score = 241 bits (266), Expect = 1e-58
Identities = 423/615 (69%), Gaps = 6/615 (1%)
Strand=Plus/Plus
Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783
||||| | |||||| || || ||| ||||||||| ||| | || |||| ||| ||
Sbjct 261429 TACTTCGGCTTCAAGACGCTCGAGCGGTCGTACCTGCTCCGCCTCGACGGCAAGGTGGCC 261488
Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843
||||||||||| || |||| ||||| ||||| |||| || |||||| ||||||| |
Sbjct 261489 GAGCGACCGCAGCACATGCTCATGCGTGTCGCGGTCGGCATCCACGGCGACGACATTGAG 261548
Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCCACCCCG 93900
| | | | | || |||| ||| | |||| ||| ||| | |||
Sbjct 261549 CGCGCGATCGAGACGTACAACCTCATGTCGGA---GCGGTACTTTACGCACGCCTCGCCG 261605
Query 93901 ACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAAC 93960
|| || |||||||| || || ||| || ||| | || ||||| ||||| | ||||
Sbjct 261606 ACGCTCTTCAACGCCGGCACGCCGCACCCGCAGCTCTCGTCGTGCTTCCTCGTCACGATG 261665
Query 93961 AAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAA 94020
|||| |||||| ||| || || | ||||| |||||| || ||| |||||| ||
Sbjct 261666 AAGGACGACTCGATCGAGGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAG 261725
Query 94021 TACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGC 94080
|| || || ||||| || ||||| || | || || | || || |||||| |
Sbjct 261726 ACGGCCGGCGGCATCGGTCTCTCGATCCACAACATCCGCGCGACCGGCTCGTACATCGCC 261785
Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140
|| || || ||| ||| |||||| || |||| |||||||| || | ||||||| | |||
Sbjct 261786 GGCACGAACGGCTACTCGAACGGCATCATCCCCATGCTCCGCGTGTACAACAACACCGCG 261845
Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200
|||||||| |||||||| || | | | ||| | ||||| |||| ||||||||
Sbjct 261846 CGCTACGTCGACCAGGGCGGCAACAAGCGCCCGGGCGCGTTCGCCATCTACCTCGAGCCG 261905
Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260
|||||||| ||| | | ||| ||||||| || |||||||||||||| || ||
Sbjct 261906 TGGCACGCCGACATCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTC 261965
Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320
| || | ||| | |||| || |||||| | || ||||| || ||| | || ||||||
Sbjct 261966 CGCGCGCGCGACTTGTTCTTTGCCCTCTGGATTCCCGACCTCTTCATGGAGCGTGTCGAG 262025
Query 94321 AAAAACTCCGCCTGG 94335
| ||| || ||||
Sbjct 262026 CAGAACGGCGACTGG 262040
Score = 138 bits (152), Expect = 1e-27
Identities = 226/318 (71%), Gaps = 6/318 (2%)
Strand=Plus/Plus
Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163
|| || ||||| || || || || |||||||||||| ||||||| ||||||| ||
Sbjct 262947 GCGCCGATGCCGACCGCGTCGACCAGTCAGATCCTTGGCTTCAACGAGGCGTTCGAGCCG 263006
Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223
| ||| |||||| | |||| | | || || |||||||| || |||| ||| |||||
Sbjct 263007 TACACGTCCAACATCTACACCCGCCGTGTCCTCGCCGGCGAGTTCCAAGTCGTCAACCCC 263066
Query 95224 CACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACT 95282
||||| || ||||| | || | | || ||||| ||| | | ||||| ||
Sbjct 263067 TGGCTCCTCCGCGACCTCGTCGAC-CGCGGCCTGTGGAACGACGCGATGAAGAA-CACGA 263124
Query 95283 GCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGC 95341
| ||||| ||||||||| |||||||| |||| || || || || |||| ||||
Sbjct 263125 TCATCGCGCACAACGGCTCGATCCAGAACGTCCCCGGTATCCCTGATGAGCTCAA-GCGC 263183
Query 95342 -TCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGC 95400
|||||||||| |||||||||||| ||||| || | |||||| | | |||| ||||
Sbjct 263184 ATCTACAAGACGGTGTGGGAGATCTCGCAGAAGGTCGTCATCGACCTCTCCGCCGACCGC 263243
Query 95401 GGGCCCTTCATCTGCCAG 95418
|| | |||||| ||||
Sbjct 263244 GGAGCGTTCATCGACCAG 263261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722822773560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |