Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542305.1_202016-01- 27] 61 sequences; 20,750,089 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq11 127 2e-24 >seq11 Length=389204 Score = 127 bits (140), Expect = 2e-24 Identities = 301/444 (68%), Gaps = 13/444 (3%) Strand=Plus/Minus Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGC 147940 |||||||||||||||| || || | ||||| ||| | ||| || ||||| |||| Sbjct 261921 AGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCGC 261862 Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000 |||||||||| | |||| | ||||||| ||||||| | |||||| | |||| ||| Sbjct 261861 CCTGGTCGACGTAGCGCGCGGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCG 261802 Query 148001 CAGT-GCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACG 148059 ||| |||||| ||| ||| | |||| || || | | ||| | | Sbjct 261801 -AGTAGCCGTTCGTGCCGGCGATGTACGAGCCGGTCGCGCGGATGTTGTGGATCGAGAGA 261743 Query 148060 CCAATGCCGCCG-CCGTACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATG 148116 || ||||||||| |||| ||| || ||| ||||| || | | || ||||||| Sbjct 261742 CCGATGCCGCCGGCCGT-CTTGGAGATGAGCGCGCA--CGTCTTGAGCGTGTCGTAGATG 261686 Query 148117 CCGTCGATGCTGTCGTTTTTGA-CGCCAAGCAAAAAACACGAACACATTTGCGGAATCCG 148175 || ||||| ||||| || | || | | | || ||||| | | ||||| | | Sbjct 261685 CCCTCGATCGAGTCGTCCTTCATCGTGACG-AGGAAGCACGACGAGAGCTGCGGGTGCGG 261627 Query 148176 CGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCG 148235 ||| || || ||| || || || ||||||||||| | | ||| | | Sbjct 261626 CGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTAAAGTACCGCTCCGACATGAGGTT 261567 Query 148236 ATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAG 148295 |||||||| || ||| || |||||||||||||| ||||| | |||||| |||||||| Sbjct 261566 GTACGTCTCGATCGCGCGCTCAATGTCGTCGCCGTGGATGCCGACCGCGACACGCATGAG 261507 Query 148296 CATGTGCTGTGGTCGTTCGGCAAC 148319 ||||||||| ||||| ||||| || Sbjct 261506 CATGTGCTGCGGTCGCTCGGCCAC 261483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610836583960