Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001542305.1_202016-01-
27] 61 sequences; 20,750,089 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq6 111 1e-19
>seq6
Length=733724
Score = 111 bits (122), Expect = 1e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 29629 CCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAG 29688
|| ||||||||| || | ||||| || |||||||| ||||||||||| || || || ||
Sbjct 242221 CCGCTCGAGCTGCGTCTTGAGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCCGAG 242280
Query 29689 GGTGTGGACAAACTCTCCCGGT-TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGA 29747
| ||| ||||| |||| || | |||||||| | || ||||||| ||| ||||
Sbjct 242281 TTGGAGGATGAACTCATGCGGTATCGTG-TCGGTGACGAGGGCGATCATGTGCGTCAGGA 242339
Query 29748 GAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGA 29807
| | ||| ||||||||| |||||||| ||||| || | ||| | || | |||||| |
Sbjct 242340 GGGCGTACGAGGCGATGTTGAAGGGCACGCCGAGGCCGAGGTCGGCAGAGCGCTGGTACA 242399
Query 29808 GCTGGCACGAGAG 29820
|||| |||||
Sbjct 242400 TGAGGCAGGAGAG 242412
Score = 109 bits (120), Expect = 4e-19
Identities = 144/197 (73%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 30033 ACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAA 30092
||||||| || ||||||| || ||| |||||| ||||| ||||| | | ||| | |
Sbjct 242782 ACCCGTAGACGGGTCCCAAATCACCCACTTCCCGGTGCTGCAAGCCGCGCGAGTCGAGGA 242841
Query 30093 AGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGT 30152
| |||| | |||||| | ||||||||||| || |||||||| | | | | || ||||
Sbjct 242842 ACTCTCGGCTGCCGTTGCCATCCCAGATCTTGACGCCCTTCTCCGCCAACACCTTCGAGT 242901
Query 30153 TTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 30211
||| | ||||| ||| ||||||| ||||||||| | || | | | ||||||| |
Sbjct 242902 CGGTGCATCCCTC-GACAAACCACAACAGCTCCTCGATGATGCCGCGCGAAAAGACGCGT 242960
Query 30212 TTGGTCGTGAGGAGGGG 30228
|||||||| | ||| ||
Sbjct 242961 TTGGTCGTCAAGAGCGG 242977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406162898043046
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |