Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600115.1_202016-03-
01] 88 sequences; 20,492,593 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq12 125 8e-24
>seq12
Length=734256
Score = 125 bits (138), Expect = 8e-24
Identities = 141/186 (76%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731
||||| ||| || ||||| ||||||| |||||||||||||||||| || || | ||
Sbjct 491478 AGCTGCGTCTTGAGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCCGAGTTGGAGG 491419
Query 145732 ATGAAGTCCC-CGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790
||||| || ||| ||| | | |||| | |||||| ||||| ||||| |||| |||
Sbjct 491418 ATGAACTCATGCGGTATCGTGTCG-GTGACGAGGGCGATCATGTGCGTCAGGAGGGCGTA 491360
Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850
||| |||||||||||||| || || || | ||| | ||||||||||||| ||||
Sbjct 491359 CGAGGCGATGTTGAAGGGCACGCCGAGGCCGAGGTCGGCAGAGCGCTGGTACATGAGGCA 491300
Query 145851 GGAGAG 145856
||||||
Sbjct 491299 GGAGAG 491294
Score = 96.9 bits (106), Expect = 4e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 146069 ACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGA 146128
||||||||||||| |||| || || |||| |||| || ||| | | ||||||
Sbjct 490924 ACCCGTAGACGGGTCCCAAATCACCCACTTCCCGGTGCTGCAAGCCGCGCGAGTCGAGGA 490865
Query 146129 AGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGT 146188
| || ||| |||||| | |||||||||||||||||| || | | | | | || ||||
Sbjct 490864 ACTCTCGGCTGCCGTTGCCATCCCAGATCTTGACGCCCTTCTCCGCCAACACCTTCGAGT 490805
Query 146189 CCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCT 146248
| ||| | ||| || ||||| | |||||| |||| || || | | | ||||| | |
Sbjct 490804 CGGTGCATCCCTCGACAAACCACAACAGCTCCTCGATGATGCCGCGCGAAAAGACGCGTT 490745
Query 146249 TGGTGGTCAGCAGGGGGA 146266
|||| |||| || ||||
Sbjct 490744 TGGTCGTCAAGAGCGGGA 490727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076150915520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |