Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600115.1_202016-03-
01] 88 sequences; 20,492,593 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq4 87.8 1e-12
>seq4
Length=1400164
Score = 87.8 bits (96), Expect = 1e-12
Identities = 109/147 (74%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 33571 CCAGAGATGGGCGACAAGTTTGCATCGTTC-ACGGCCCAGAAGGGCACGTGCGGCATGAT 33629
|| ||||| || |||||||| || || | |||| | ||||||| ||| |||||| |
Sbjct 59898 CCCGAGATCGGTGACAAGTTCGCCTCTCGCCACGGTC-AGAAGGGTACGATCGGCATTAC 59840
Query 33630 GTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAA 33689
||| ||| ||||||||||||| |||| || || | || ||||| |||||||
Sbjct 59839 CTACCGCCACGAGGACATGCCGTTCTCGGCAGAGGGGATCACGCCCGACCTGATCATCAA 59780
Query 33690 CCCGCATGCGTTCCCCTCGCGCATGAC 33716
||| || || ||||||||||||||||
Sbjct 59779 CCCTCACGCCATCCCCTCGCGCATGAC 59753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233217939464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |