Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600115.1_202016-03- 01] 88 sequences; 20,492,593 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq21 87.8 2e-12 >seq21 Length=262679 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561 ||||||||||| ||||| |||| || | |||||||| || ||||| | ||| | ||| Sbjct 18180 GAAGCCGTCGAGATCGAGCAAGAATTCCTGACGGACGCCTTGCCCGTCGGCTTGATCGGC 18121 Query 50562 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTG-TTGTTGCA 50620 |||||||| | | ||| | ||||||| ||||| || || ||| ||||| |||| || Sbjct 18120 ATGAACGCCACCCTCATGCGACAGTACATCGAGTTCGTCGCGGACCGATTGCTTGTCGC- 18062 Query 50621 GCT--GGGACAACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATA 50678 ||| || || || || || ||||| ||||| || |||||| | | || Sbjct 18061 GCTCGGGAACGAC--AAGCTGTACAATGCCGAGAACCCGTTCGACTTTATGGAGATGATC 18004 Query 50679 TCGTTGGAGGGCAAAACAAA 50698 ||| |||||||||| || || Sbjct 18003 TCGATGGAGGGCAAGACCAA 17984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543462601600