Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600135.1_202016-03-
01] 78 sequences; 20,389,818 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq19 114 2e-20
>seq19
Length=515428
Score = 114 bits (126), Expect = 2e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 146069 ACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGA 146128
|||| ||||| || |||| ||| || |||| |||| || || | | ||||||
Sbjct 272677 ACCCATAGACTGGTCCCAAGTCACCCACTTCCCGGTGCTGCAAGCCTCGCGAGTCGAGGA 272618
Query 146129 AGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGT 146188
| || ||| |||||| |||||||||||||||||||| || | | ||| | || ||||
Sbjct 272617 ACTCTCGGCTGCCGTTGCCGTCCCAGATCTTGACGCCCTTCTCCGCCAGCACCTTCGAGT 272558
Query 146189 CCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCT 146248
||||| | ||| || |||||| | |||||| || | || || | | ||||||| | ||
Sbjct 272557 CCGTGCATCCCTCGACGAACCACAACAGCTCCTCAATGATGCCGCGCGAGAAGACACGCT 272498
Query 146249 TGGTGGTCAGCAGGGGGA 146266
|||| ||||| || ||||
Sbjct 272497 TGGTCGTCAGGAGCGGGA 272480
Score = 104 bits (114), Expect = 3e-17
Identities = 136/186 (73%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731
||||| ||| || ||||| ||||||| |||||||||||||||||| || || | ||
Sbjct 273231 AGCTGCGTCTTGAGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCCGAGCTGGAGG 273172
Query 145732 ATGAAGTCCCC-GGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790
||||| || ||| ||| | | | || | | |||| ||||| |||| || | ||
Sbjct 273171 ATGAACTCGTGTGGGATCGTGTCG-GAGACGAGAGCGATCATGTGCGTCAAGAGCGCATA 273113
Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850
||| |||||||||||||| || || || | ||| | ||||||||||||| ||||
Sbjct 273112 CGAGGCGATGTTGAAGGGCACGCCGAGGCCGAGGTCGGCGGAGCGCTGGTACATGAGGCA 273053
Query 145851 GGAGAG 145856
||||||
Sbjct 273052 GGAGAG 273047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076224675120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |