Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600135.1_202016-03- 01] 78 sequences; 20,389,818 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 >seq1 Length=1973210 Score = 127 bits (140), Expect = 2e-24 Identities = 251/367 (68%), Gaps = 7/367 (2%) Strand=Plus/Minus Query 11591 CGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGG 11650 |||| |||||||| || ||| |||||||||| |||| || ||||| |||||| | Sbjct 1712683 CGAAGCCGTCCATCTCGACGAGGAGCTGGTTGAGCGTCGACTCGCGCTCGTCGTTGCCGC 1712624 Query 11651 GCATACCACCTGCCGA----ACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACG 11706 | || | ||| ||| ||| |||| ||||||||||| |||||||| | | Sbjct 1712623 CGA-ACTGGCCGCCCTTTCCACGGGCCTTTCCGATCGCGTCAATCTCGTCGATGAAGATG 1712565 Query 11707 ATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACA 11766 || ||||| ||| ||||| |||||| || || ||||| | || || ||| Sbjct 1712564 ATGCACGGCGCGTTCTTCTTGGCCTGGGTGAAAAGGTCGCGGACACGACTGGCACCGACA 1712505 Query 11767 CCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACTC 11825 || ||||||||||| ||||| | | | | || || || | |||||| || | || Sbjct 1712504 CCGACGAACATCTCGACGAACTCGGAGCCGGAG-ACGGAGAGGAAGGGGACGCCGGCTTC 1712446 Query 11826 ACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGC 11885 || ||| | ||| |||||||| ||||| || ||||| || | || | ||| | ||| Sbjct 1712445 GCCTGCGGTCGCTTTGGCGAGGAGCGTCTTGCCGGTACCGGGAGGGCCGGAGAGGATGGC 1712386 Query 11886 GCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCAC 11945 ||| || |||||||||||||| | |||| | || || ||||||||||| | || Sbjct 1712385 GCCGCGAGGGATCTTGGCACCGAGGCGCTCGTAGTGTTCGGGGTTCTTGAGGAACTTGAC 1712326 Query 11946 AATCTCC 11952 | |||| Sbjct 1712325 GAACTCC 1712319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975425748400