Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600135.1_202016-03-
01] 78 sequences; 20,389,818 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
>seq1
Length=1973210
Score = 127 bits (140), Expect = 2e-24
Identities = 251/367 (68%), Gaps = 7/367 (2%)
Strand=Plus/Minus
Query 11591 CGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGG 11650
|||| |||||||| || ||| |||||||||| |||| || ||||| |||||| |
Sbjct 1712683 CGAAGCCGTCCATCTCGACGAGGAGCTGGTTGAGCGTCGACTCGCGCTCGTCGTTGCCGC 1712624
Query 11651 GCATACCACCTGCCGA----ACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACG 11706
| || | ||| ||| ||| |||| ||||||||||| |||||||| | |
Sbjct 1712623 CGA-ACTGGCCGCCCTTTCCACGGGCCTTTCCGATCGCGTCAATCTCGTCGATGAAGATG 1712565
Query 11707 ATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACA 11766
|| ||||| ||| ||||| |||||| || || ||||| | || || |||
Sbjct 1712564 ATGCACGGCGCGTTCTTCTTGGCCTGGGTGAAAAGGTCGCGGACACGACTGGCACCGACA 1712505
Query 11767 CCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACTC 11825
|| ||||||||||| ||||| | | | | || || || | |||||| || | ||
Sbjct 1712504 CCGACGAACATCTCGACGAACTCGGAGCCGGAG-ACGGAGAGGAAGGGGACGCCGGCTTC 1712446
Query 11826 ACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGC 11885
|| ||| | ||| |||||||| ||||| || ||||| || | || | ||| | |||
Sbjct 1712445 GCCTGCGGTCGCTTTGGCGAGGAGCGTCTTGCCGGTACCGGGAGGGCCGGAGAGGATGGC 1712386
Query 11886 GCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCAC 11945
||| || |||||||||||||| | |||| | || || ||||||||||| | ||
Sbjct 1712385 GCCGCGAGGGATCTTGGCACCGAGGCGCTCGTAGTGTTCGGGGTTCTTGAGGAACTTGAC 1712326
Query 11946 AATCTCC 11952
| ||||
Sbjct 1712325 GAACTCC 1712319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975425748400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |