Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600135.1_202016-03- 01] 78 sequences; 20,389,818 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq13 141 1e-28 >seq13 Length=704413 Score = 141 bits (156), Expect = 1e-28 Identities = 485/747 (65%), Gaps = 17/747 (2%) Strand=Plus/Minus Query 106575 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAA 106634 ||||| |||||||||||||||||| |||| | |||||||| ||| | || ||| | Sbjct 568320 TGTTGGCGGCATCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGA 568261 Query 106635 TTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 106693 || | ||| | | || | ||| || | || ||||| || |||||| ||||||| Sbjct 568260 CGGCGTACCAGAGCTTCTG-GGCGGGGATGGTGCGCTTGGCGCGACCCTCCTTCTCGTAC 568202 Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753 ||| |||| | | ||||| || || | ||| |||||| || |||| | | Sbjct 568201 TTTTCAAAGAGCTCCTTGAACTCGTCGCCGTAGACCTCGTGGAGACCGGGCGCCTCGGCC 568142 Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || ||||| || | ||| | || || ||| || |||| |||||| ||||| || ||| Sbjct 568141 GGGCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGGATC 568082 Query 106814 CACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 106873 || |||| | || | || | || |||| || | || ||||| || | Sbjct 568081 CAAAGGGCAAAGAACAAGTCGCGCGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGG 568022 Query 106874 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTT 106933 || |||||||| | ||| || |||||||| ||||| || |||| |||| | ||| Sbjct 568021 TCGAGGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCC--- 567965 Query 106934 CGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 106987 | ||| || | || | || |||||||| ||| ||| | ||||| ||||| Sbjct 567964 GGGCGCTTGTTGCCTCCCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATG 567905 Query 106988 GGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCA 107045 || || || || | || | || || || || ||| ||| || | || | | Sbjct 567904 GGGATGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAC--GAACCGGTCGCGCGGA 567847 Query 107046 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105 | ||||| | || || || || ||| ||| ||||| |||| ||| | | | Sbjct 567846 TGTTGTGGATCGAGAGGCCGATGCCGCCTGCCGTCTTGGAGATGAGCGCGCACGTCTTGA 567787 Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165 | || | ||||| || | ||| ||||| ||||| | | || |||||||| || | Sbjct 567786 GCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATCGTGACGAGGAAGCACGACGAGA 567727 Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC-T 107224 |||||| || || || || |||||||| || || | ||||| | || |||| Sbjct 567726 GCTGCGGGTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGT-AAAGTACCGC 567668 Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 | ||||| || ||| ||||| | | |||||||| || ||||||||||||| Sbjct 567667 TCCGACATGAGGTTGTACGTCTCGATCGCGCGGTCAATGTCGTCGCCGTGGATGCCGACC 567608 Query 107285 GCCACACGCATAAACATGTATTGGGGT 107311 || || ||||| | ||||| || ||| Sbjct 567607 GCGACGCGCATGAGCATGTGCTGCGGT 567581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980224768720