Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600135.1_202016-03-
01] 78 sequences; 20,389,818 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq13 136 4e-27
>seq13
Length=704413
Score = 136 bits (150), Expect = 4e-27
Identities = 303/444 (68%), Gaps = 13/444 (3%)
Strand=Plus/Minus
Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGC 147940
|||||||||||||||| || || | ||||| ||| | ||| || ||||| || |
Sbjct 568008 AGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCTC 567949
Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000
|||||||||| | |||| || ||||||| ||||||| | |||||| | |||| |||
Sbjct 567948 CCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCG 567889
Query 148001 CAGT-GCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACG 148059
||| |||||| ||| ||| | ||| || || | | ||| | | |
Sbjct 567888 -AGTAGCCGTTCGTGCCGGCGATGTACGAACCGGTCGCGCGGATGTTGTGGATCGAGAGG 567830
Query 148060 CCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATG 148116
|| |||||||| ||||| ||| || ||| ||||| || | | || |||||||
Sbjct 567829 CCGATGCCGCCTGCCGT-CTTGGAGATGAGCGCGCA--CGTCTTGAGCGTGTCGTAGATG 567773
Query 148117 CCGTCGATGCTGTCGTTTTTGA-CGCCAAGCAAAAAACACGAACACATTTGCGGAATCCG 148175
|| ||||| ||||| || | || | | | || ||||| | | ||||| | |
Sbjct 567772 CCCTCGATCGAGTCGTCCTTCATCGTGACG-AGGAAGCACGACGAGAGCTGCGGGTGCGG 567714
Query 148176 CGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCG 148235
||| || || ||| || || || |||||||||||| | | ||| | |
Sbjct 567713 CGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAAGTACCGCTCCGACATGAGGTT 567654
Query 148236 ATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAG 148295
|||||||| || ||| || |||||||||||||| ||||| | |||||||||||||||
Sbjct 567653 GTACGTCTCGATCGCGCGGTCAATGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAG 567594
Query 148296 CATGTGCTGTGGTCGTTCGGCAAC 148319
||||||||| ||||| ||||| ||
Sbjct 567593 CATGTGCTGCGGTCGCTCGGCCAC 567570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610735304080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |