Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600135.1_202016-03- 01] 78 sequences; 20,389,818 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq13 136 4e-27 >seq13 Length=704413 Score = 136 bits (150), Expect = 4e-27 Identities = 303/444 (68%), Gaps = 13/444 (3%) Strand=Plus/Minus Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGC 147940 |||||||||||||||| || || | ||||| ||| | ||| || ||||| || | Sbjct 568008 AGATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCCGGGCGCTTGTTGCCTC 567949 Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000 |||||||||| | |||| || ||||||| ||||||| | |||||| | |||| ||| Sbjct 567948 CCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCG 567889 Query 148001 CAGT-GCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACG 148059 ||| |||||| ||| ||| | ||| || || | | ||| | | | Sbjct 567888 -AGTAGCCGTTCGTGCCGGCGATGTACGAACCGGTCGCGCGGATGTTGTGGATCGAGAGG 567830 Query 148060 CCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATG 148116 || |||||||| ||||| ||| || ||| ||||| || | | || ||||||| Sbjct 567829 CCGATGCCGCCTGCCGT-CTTGGAGATGAGCGCGCA--CGTCTTGAGCGTGTCGTAGATG 567773 Query 148117 CCGTCGATGCTGTCGTTTTTGA-CGCCAAGCAAAAAACACGAACACATTTGCGGAATCCG 148175 || ||||| ||||| || | || | | | || ||||| | | ||||| | | Sbjct 567772 CCCTCGATCGAGTCGTCCTTCATCGTGACG-AGGAAGCACGACGAGAGCTGCGGGTGCGG 567714 Query 148176 CGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCG 148235 ||| || || ||| || || || |||||||||||| | | ||| | | Sbjct 567713 CGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAAGTACCGCTCCGACATGAGGTT 567654 Query 148236 ATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAG 148295 |||||||| || ||| || |||||||||||||| ||||| | ||||||||||||||| Sbjct 567653 GTACGTCTCGATCGCGCGGTCAATGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAG 567594 Query 148296 CATGTGCTGTGGTCGTTCGGCAAC 148319 ||||||||| ||||| ||||| || Sbjct 567593 CATGTGCTGCGGTCGCTCGGCCAC 567570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610735304080