Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600135.1_202016-03- 01] 78 sequences; 20,389,818 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq19 127 2e-24 >seq19 Length=515428 Score = 127 bits (140), Expect = 2e-24 Identities = 148/197 (75%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 30261 ACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAA 30320 |||| || || ||||||| ||| ||| |||||| ||||| ||||| | | ||| | | Sbjct 272677 ACCCATAGACTGGTCCCAAGTCACCCACTTCCCGGTGCTGCAAGCCTCGCGAGTCGAGGA 272618 Query 30321 AGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGT 30380 | |||| | |||||| ||||||||||||| || |||||||| | ||| | || |||| Sbjct 272617 ACTCTCGGCTGCCGTTGCCGTCCCAGATCTTGACGCCCTTCTCCGCCAGCACCTTCGAGT 272558 Query 30381 TTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 30439 ||| | ||||| ||||||||||| ||||||||| | || | | | | ||||| | | Sbjct 272557 CCGTGCATCCCTC-GACGAACCACAACAGCTCCTCAATGATGCCGCGCGAGAAGACACGC 272499 Query 30440 TTGGTCGTGAGGAGGGG 30456 |||||||| ||||| || Sbjct 272498 TTGGTCGTCAGGAGCGG 272482 Score = 98.7 bits (108), Expect = 8e-16 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 29857 CCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAG 29916 || ||||||||| ||||| ||||| || |||| || ||||||||||| ||||| || || Sbjct 273238 CCGCTCGAGCTGCGTCTTGAGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCCGAG 273179 Query 29917 GTTGTGGACAAACTC-TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGA 29975 | | ||| ||||| | || || | ||| |||| |||| ||||||| ||| | || Sbjct 273178 CTGGAGGATGAACTCGTGTGGGATCGTG-TCGGAGACGAGAGCGATCATGTGCGTCAAGA 273120 Query 29976 GAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTA 30033 | | || ||||||||| ||||| || ||||| || | ||| | || | |||||| Sbjct 273119 GCGCATACGAGGCGATGTTGAAGGGCACGCCGAGGCCGAGGTCGGCGGAGCGCTGGTA 273062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310013751176