Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600135.1_202016-03-
01] 78 sequences; 20,389,818 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq19 93.3 4e-14
>seq19
Length=515428
Score = 93.3 bits (102), Expect = 4e-14
Identities = 148/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
||||| |||||||| || ||||| | || | ||| | | ||||||||| ||||||||
Sbjct 272482 CCGCTCCTGACGACCAAGCGTGTCTTCTCGCGCGGCATCATTGAGGAGCTGTTGTGGTTC 272541
Query 34283 GT-GAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGC 34341
|| ||||| || ||| || | |||| ||| || ||| || |||||||||||||
Sbjct 272542 GTCGAGGGATGC-ACGGACTCGAAGGTGCTGGCGGAGAAGGGCGTCAAGATCTGGGACGG 272600
Query 34342 TCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTT 34401
|||| ||||| || || ||| ||| || || | ||||| | ||| |||||
Sbjct 272601 CAACGGCAGCCGAGAGTTCCTCGACTCGCGAGGCTTGCAGCACCGGGAAGTGGGTGACTT 272660
Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGAC 34430
||| || ||||| |||| ||| |||||
Sbjct 272661 GGGACCAGTCTATGGGT--GAGTTGAGAC 272687
Score = 93.3 bits (102), Expect = 4e-14
Identities = 148/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 6915 GTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCC 6974
||||| ||| |||| ||||| || |||||||| ||| | ||||| | || || |
Sbjct 272687 GTCTCAACTC--ACCCATAGACTGGTCCCAAGTCACCCACTTCCCGGTGCTGCAAGCCTC 272630
Query 6975 GCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGA 7034
|| ||| || || ||||| |||| ||||||||||||| || ||| || |
Sbjct 272629 GCGAGTCGAGGAACTCTCGGCTGCCGTTGCCGTCCCAGATCTTGACGCCCTTCTCCGCCA 272570
Query 7035 GCTCCTTGGTGTTCGTGGCCCCCCTC-ACGAACCACAGCAGCTCCTCGACCACGCCCTTC 7093
|| |||| | || ||| || ||||| |||||||||| ||||||||| | | ||| |
Sbjct 272569 GCACCTTCGAGTCCGT-GCATCCCTCGACGAACCACAACAGCTCCTCAATGATGCCGCGC 272511
Query 7094 CAGTACACACGTTTCGTCGTCAGCAGCGG 7122
|| | ||||| || |||||||| |||||
Sbjct 272510 GAGAAGACACGCTTGGTCGTCAGGAGCGG 272482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448261962944160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |