Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600135.1_202016-03- 01] 78 sequences; 20,389,818 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq19 93.3 4e-14 >seq19 Length=515428 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 ||||| |||||||| || ||||| | || | ||| | | ||||||||| |||||||| Sbjct 272482 CCGCTCCTGACGACCAAGCGTGTCTTCTCGCGCGGCATCATTGAGGAGCTGTTGTGGTTC 272541 Query 34283 GT-GAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGC 34341 || ||||| || ||| || | |||| ||| || ||| || ||||||||||||| Sbjct 272542 GTCGAGGGATGC-ACGGACTCGAAGGTGCTGGCGGAGAAGGGCGTCAAGATCTGGGACGG 272600 Query 34342 TCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTT 34401 |||| ||||| || || ||| ||| || || | ||||| | ||| ||||| Sbjct 272601 CAACGGCAGCCGAGAGTTCCTCGACTCGCGAGGCTTGCAGCACCGGGAAGTGGGTGACTT 272660 Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGAC 34430 ||| || ||||| |||| ||| ||||| Sbjct 272661 GGGACCAGTCTATGGGT--GAGTTGAGAC 272687 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 6915 GTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCC 6974 ||||| ||| |||| ||||| || |||||||| ||| | ||||| | || || | Sbjct 272687 GTCTCAACTC--ACCCATAGACTGGTCCCAAGTCACCCACTTCCCGGTGCTGCAAGCCTC 272630 Query 6975 GCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGA 7034 || ||| || || ||||| |||| ||||||||||||| || ||| || | Sbjct 272629 GCGAGTCGAGGAACTCTCGGCTGCCGTTGCCGTCCCAGATCTTGACGCCCTTCTCCGCCA 272570 Query 7035 GCTCCTTGGTGTTCGTGGCCCCCCTC-ACGAACCACAGCAGCTCCTCGACCACGCCCTTC 7093 || |||| | || ||| || ||||| |||||||||| ||||||||| | | ||| | Sbjct 272569 GCACCTTCGAGTCCGT-GCATCCCTCGACGAACCACAACAGCTCCTCAATGATGCCGCGC 272511 Query 7094 CAGTACACACGTTTCGTCGTCAGCAGCGG 7122 || | ||||| || |||||||| ||||| Sbjct 272510 GAGAAGACACGCTTGGTCGTCAGGAGCGG 272482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261962944160