Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600135.1_202016-03-
01] 78 sequences; 20,389,818 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq19 127 2e-24
>seq19
Length=515428
Score = 127 bits (140), Expect = 2e-24
Identities = 148/197 (75%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 30033 ACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAA 30092
|||| || || ||||||| ||| ||| |||||| ||||| ||||| | | ||| | |
Sbjct 272677 ACCCATAGACTGGTCCCAAGTCACCCACTTCCCGGTGCTGCAAGCCTCGCGAGTCGAGGA 272618
Query 30093 AGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGT 30152
| |||| | |||||| ||||||||||||| || |||||||| | ||| | || ||||
Sbjct 272617 ACTCTCGGCTGCCGTTGCCGTCCCAGATCTTGACGCCCTTCTCCGCCAGCACCTTCGAGT 272558
Query 30153 TTGTGGA-CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 30211
||| | ||||| ||||||||||| ||||||||| | || | | | | ||||| | |
Sbjct 272557 CCGTGCATCCCTC-GACGAACCACAACAGCTCCTCAATGATGCCGCGCGAGAAGACACGC 272499
Query 30212 TTGGTCGTGAGGAGGGG 30228
|||||||| ||||| ||
Sbjct 272498 TTGGTCGTCAGGAGCGG 272482
Score = 98.7 bits (108), Expect = 8e-16
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 29629 CCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAG 29688
|| ||||||||| || | ||||| || |||||||| ||||||||||| || || || ||
Sbjct 273238 CCGCTCGAGCTGCGTCTTGAGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCCGAG 273179
Query 29689 GGTGTGGACAAACTC-TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGA 29747
| ||| ||||| | || || | ||| |||| |||| ||||||| ||| | ||
Sbjct 273178 CTGGAGGATGAACTCGTGTGGGATCGTG-TCGGAGACGAGAGCGATCATGTGCGTCAAGA 273120
Query 29748 GAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGA 29807
| | || ||||||||| |||||||| ||||| || | ||| | || | |||||| |
Sbjct 273119 GCGCATACGAGGCGATGTTGAAGGGCACGCCGAGGCCGAGGTCGGCGGAGCGCTGGTACA 273060
Query 29808 GCTGGCACGAGAG 29820
|||| |||||
Sbjct 273059 TGAGGCAGGAGAG 273047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406162813891108
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |