Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600155.1_202016-03-
01] 53 sequences; 20,270,281 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq16 125 8e-24
>seq16
Length=742613
Score = 125 bits (138), Expect = 8e-24
Identities = 141/186 (76%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731
||||| ||| || ||||| ||||||| |||||||||||||||||| || || | ||
Sbjct 243076 AGCTGCGTCTTGAGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCCGAGTTGGAGG 243135
Query 145732 ATGAAGTCCC-CGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790
||||| || ||| ||| | | |||| | |||||| ||||| ||||| |||| |||
Sbjct 243136 ATGAACTCATGCGGTATCGTGTCG-GTGACGAGGGCGATCATGTGCGTCAGGAGGGCGTA 243194
Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850
||| |||||||||||||| || || || | ||| | ||||||||||||| ||||
Sbjct 243195 CGAGGCGATGTTGAAGGGCACGCCGAGGCCGAGGTCGGCAGAGCGCTGGTACATGAGGCA 243254
Query 145851 GGAGAG 145856
||||||
Sbjct 243255 GGAGAG 243260
Score = 96.9 bits (106), Expect = 4e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 146069 ACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGA 146128
||||||||||||| |||| || || |||| |||| || ||| | | ||||||
Sbjct 243630 ACCCGTAGACGGGTCCCAAATCACCCACTTCCCGGTGCTGCAAGCCGCGCGAGTCGAGGA 243689
Query 146129 AGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGT 146188
| || ||| |||||| | |||||||||||||||||| || | | | | | || ||||
Sbjct 243690 ACTCTCGGCTGCCGTTGCCATCCCAGATCTTGACGCCCTTCTCCGCCAACACCTTCGAGT 243749
Query 146189 CCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCT 146248
| ||| | ||| || ||||| | |||||| |||| || || | | | ||||| | |
Sbjct 243750 CGGTGCATCCCTCGACAAACCACAACAGCTCCTCGATGATGCCGCGCGAAAAGACGCGTT 243809
Query 146249 TGGTGGTCAGCAGGGGGA 146266
|||| |||| || ||||
Sbjct 243810 TGGTCGTCAAGAGCGGGA 243827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076409074120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |