Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600155.1_202016-03- 01] 53 sequences; 20,270,281 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq21 82.4 8e-11 >seq21 Length=276254 Score = 82.4 bits (90), Expect = 8e-11 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 || |||||||| || || |||| || | |||||||| || ||||| ||| | ||| Sbjct 32273 GAAGCCGTCGAGATCGAGCAAGAATTCCTGACGGACGCCTTGCCCGTCGGCTTGATCGGC 32214 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTG-TTGATGCA 52955 |||||||| ||| | ||| | ||||||||||||| || |||||| || || ||| || Sbjct 32213 ATGAACGCCACCCTCATGCGACAGTACATCGAGTTCGTCGCGGACCGATTGCTTGTCGC- 32155 Query 52956 GCTCGGTCAGCCGAAATAC--TATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATA 53013 |||||| | ||| | | || ||||| ||||| || |||||| | | || Sbjct 32154 GCTCGGGAA--CGACAAGCTGTACAATGCCGAGAACCCGTTCGACTTTATGGAGATGATC 32097 Query 53014 TCGCTCGAGGGCAAAACAAA 53033 ||| | |||||||| || || Sbjct 32096 TCGATGGAGGGCAAGACCAA 32077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063671357600