Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600155.1_202016-03-
01] 53 sequences; 20,270,281 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq21 82.4 8e-11
>seq21
Length=276254
Score = 82.4 bits (90), Expect = 8e-11
Identities = 141/200 (71%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896
|| |||||||| || || |||| || | |||||||| || ||||| ||| | |||
Sbjct 32273 GAAGCCGTCGAGATCGAGCAAGAATTCCTGACGGACGCCTTGCCCGTCGGCTTGATCGGC 32214
Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTG-TTGATGCA 52955
|||||||| ||| | ||| | ||||||||||||| || |||||| || || ||| ||
Sbjct 32213 ATGAACGCCACCCTCATGCGACAGTACATCGAGTTCGTCGCGGACCGATTGCTTGTCGC- 32155
Query 52956 GCTCGGTCAGCCGAAATAC--TATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATA 53013
|||||| | ||| | | || ||||| ||||| || |||||| | | ||
Sbjct 32154 GCTCGGGAA--CGACAAGCTGTACAATGCCGAGAACCCGTTCGACTTTATGGAGATGATC 32097
Query 53014 TCGCTCGAGGGCAAAACAAA 53033
||| | |||||||| || ||
Sbjct 32096 TCGATGGAGGGCAAGACCAA 32077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063671357600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |