Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600155.1_202016-03-
01] 53 sequences; 20,270,281 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq25 140 4e-28
>seq25
Length=115453
Score = 140 bits (154), Expect = 4e-28
Identities = 481/737 (65%), Gaps = 15/737 (2%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| ||||| ||||||||||||| || |||||||| |
Sbjct 3007 CCGCAGCACATGCTCATGCGTGTCGCGGTCGGCATCCACGGCGACGACATTGAGCGCGCG 3066
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| ||||| ||| || ||||| | |||| || | ||||| | || || |||||
Sbjct 3067 ATCGAGACGTACAACCTCATGTCGGAGCGGTA-CTTTACGCACGCCTCGCCGACGCTCTT 3125
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| || || || || |||||| | || |||||||| || | | ||||| ||
Sbjct 3126 CAACGCCGGCACGCCGCACCCGCAGCTCTCGTCGTGCTTCCTCGTCACGATGAAGGACGA 3185
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
||| ||| | || ||||| | || || | | ||| |||| ||||| ||| ||| ||
Sbjct 3186 CTCGATCGAGGGCATCTACGACACGCTCAAGACGTGCGCGCTCATCTCCAAGACGGCCGG 3245
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA-TTCG-GGGGACA 75508
|| || || | ||||| | | | || | |||||| ||| || ||
Sbjct 3246 CGGCATCGGTCTCTCGATCCACAACATCCGCGCGA--CCGGCTCGTACATCGCCGGCACG 3303
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|| || | || | || || || || ||||| ||||| | ||| ||| ||||||||
Sbjct 3304 AACGGCTACTCGAACGGCATCATCCCCATGCTCCGCGTGTACAACAACACCGCGCGCTAC 3363
Query 75569 GTAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCA 75624
|| | | || | ||| ||| ||| | |||| ||||| | || || |||||
Sbjct 3364 GTCGA-CCAGGGCGGCAACAAGCGCCCGGGCGCGTTCGCCATCTACCTCGAGCCGTGGCA 3422
Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684
||||| ||| | |||||||| || | || ||||| || | || |||| ||
Sbjct 3423 CGCCGACATCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTCCGCGC 3482
Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744
| || | || | |||| |||||||| ||||| |||||| |||| || ||| ||
Sbjct 3483 GCGCGACTTGTTCTTTGCCCTCTGGATTCCCGACCTCTTCATGGAGCGTGTCGAGCAGAA 3542
Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804
|| | ||| | || ||||| || | | ||||||| || ||| ||| | || ||
Sbjct 3543 CGGCGACTGGCCCCTCTTCTGCCCTGCCGAGGCACCCGGCCTCCACGAGGTCTACGGCGA 3602
Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG-ACTGTAC 75863
||||| | | || | | |||||||| |||||||| | ||||| ||| || | |
Sbjct 3603 CGAGTTCAAGGAGCTGTTCGAGAAGTATGAGAAGGAGGGTCGCGCCAA-GCGCACCATTC 3661
Query 75864 CAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922
| ||| | || | | ||| | || || ||| | | ||| ||||| || | || |
Sbjct 3662 CCGCC-CAGAAGCTCTGGTACGCCATCCTCGAGGCCCAGGTCGAGACGGGCAACCCCTTC 3720
Query 75923 ATGCTTTACAAGGATGC 75939
||||| |||||||| ||
Sbjct 3721 ATGCTCTACAAGGACGC 3737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569204772640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |