Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600155.1_202016-03- 01] 53 sequences; 20,270,281 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 2e-15 >seq5 Length=1227376 Score = 96.9 bits (106), Expect = 2e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||||| || || || |||||| ||||| || || || ||| Sbjct 829494 CCACCGCGAAGACGAAGCACCAAGTGCAGCGTCGACTCCTTCTGAATATTGTAGTCCGAA 829435 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| ||||| || || ||||| || || || ||||| ||||| ||||| Sbjct 829434 AGCGTGCGTCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGA 829375 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | ||||||||||| |||||| Sbjct 829374 ATGCCCTCCTTGTCCTGGATCTT 829352 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || || |||||| ||||||||||| || || || ||| Sbjct 830648 AGACGAAGCACCAGGTGCAGCGTCGACTCCTTCTGAATGTTATAGTCGCTGAGCGTGCGC 830589 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || ||||| || || || ||||| ||||| ||||| | |||||| Sbjct 830588 CCGTCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGAATGCCCTCC 830529 Query 34609 TTGTCTGTGATCTT 34622 ||||| |||||| Sbjct 830528 TTGTCCTGGATCTT 830515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729396704349