Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600155.1_202016-03- 01] 53 sequences; 20,270,281 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 7e-16 >seq6 Length=1203005 Score = 98.7 bits (108), Expect = 7e-16 Identities = 137/188 (73%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 44107 CATTCCC-CCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT 44165 ||||||| || | || ||||| || ||||| || || ||||||||||||||||||| Sbjct 882644 CATTCCCACCGCGCAACCTCAAAACGAGGTGCAGGGTCGATTCCTTTTGGATGTTGTAAT 882703 Query 44166 -CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 || | || | ||| |||| || ||||||||||| || |||||||| |||||||| || Sbjct 882704 CCGACAAGGT-GCGTCCGTCCTCAAGCTGCTTCCCCGCGAAGATCAAGCGCTGCTGGTCG 882762 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | || ||||| ||| ||||| ||| | | | || ||||||| || Sbjct 882763 GGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCGGACGAC 882822 Query 44285 TCCACCTC 44292 || ||||| Sbjct 882823 TCAACCTC 882830 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/137 (74%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 44204 AAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CA 44261 |||||||| |||||||| || | ||| | || ||||| ||| ||||| ||| || Sbjct 883958 AAGATCAAGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACA 884017 Query 44262 ATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCT 44321 ||| | || ||||||| || || ||||| | || || ||||| || |||||||||| Sbjct 884018 TTGT--CGATCGTGTCGGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCT 884075 Query 44322 TCACGAAGATTTGCATG 44338 | |||||||| |||||| Sbjct 884076 TGACGAAGATCTGCATG 884092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990167468701