Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03-
01] 38 sequences; 20,321,374 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq26 100 2e-16
seq25 100 2e-16
>seq26
Length=12709
Score = 100 bits (110), Expect = 2e-16
Identities = 128/174 (74%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGT-GCACAAAGTCTCC 20983
|| || || ||||||| | ||| ||||| ||||| || ||| || | | || ||
Sbjct 11712 AGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCC-AAGCTGGAGGATGAATTCGTG 11770
Query 20984 CGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTT 21043
||| || | | |||||| ||||||||| | ||||||||||||||| |||||||||
Sbjct 11771 CGGAATCGTGTCGGTGACGAGAGCGATCATGTGCGTCAGGAGGGCGTACGAGGCGATGTT 11830
Query 21044 AAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAG 21097
|| || || |||||||| | |||||| || | |||||||| ||||||| ||
Sbjct 11831 GAAGGGTACGCCGAGGCCGAGGTCGGCAGAGCGCTGGTACATGAGGCAGGAGAG 11884
>seq25
Length=12709
Score = 100 bits (110), Expect = 2e-16
Identities = 128/174 (74%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGT-GCACAAAGTCTCC 20983
|| || || ||||||| | ||| ||||| ||||| || ||| || | | || ||
Sbjct 11712 AGCGGCTCGACGTGGTCGAGGTAGACGTGCGCGTCGCC-AAGCTGGAGGATGAATTCGTG 11770
Query 20984 CGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTT 21043
||| || | | |||||| ||||||||| | ||||||||||||||| |||||||||
Sbjct 11771 CGGAATCGTGTCGGTGACGAGAGCGATCATGTGCGTCAGGAGGGCGTACGAGGCGATGTT 11830
Query 21044 AAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAG 21097
|| || || |||||||| | |||||| || | |||||||| ||||||| ||
Sbjct 11831 GAAGGGTACGCCGAGGCCGAGGTCGGCAGAGCGCTGGTACATGAGGCAGGAGAG 11884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427775801886240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |