Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03-
01] 38 sequences; 20,321,374 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq15 93.3 9e-14
seq2 87.8 4e-12
>seq15
Length=541629
Score = 93.3 bits (102), Expect = 9e-14
Identities = 132/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 243499 CAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGC 243558
|| |||||| | ||||| || || | ||| | |||||| | ||||| | || ||
Sbjct 263028 CAGATCATCGCCGAAGCCGTCGAGATCGAGCAAGAATTCCTGACGGACGCCTTGCC-TGT 262970
Query 243559 CGGCTT-ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCG 243617
|||||| || ||||||||| | |||||| ||||||||||||| ||||| || || ||
Sbjct 262969 CGGCTTGATCGGCATGAACGCGACCCTCATGCGACAGTACATCGAGTTCGTCGCGGATCG 262910
Query 243618 CATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTAT 243677
| | ||||||| || | ||||| ||||||| || ||||||| || | ||| ||
Sbjct 262909 ACTGCTTGTCGCGCTCGGGAACGAGAAGCTGTACAATGCCGAGAACCCGTTCGACTTCAT 262850
Query 243678 GGA 243680
|||
Sbjct 262849 GGA 262847
>seq2
Length=1546248
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 334179 GAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCC 334238
|||||||| || || | ||||||||| | || |||||||| || || || || ||||
Sbjct 87947 GAGGGGAAGCCCTCGACCTGACCGTTGTCGATCGCGCGCATGAGGGTCGACTTGCCCGAA 88006
Query 334239 CCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAG 334279
||||| | ||||| ||||||||||||| ||||||||| ||
Sbjct 88007 CCGTTGCGTCCACAGAGACCGTAGCGGTGTCCACGCTTGAG 88047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879463035300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |