Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03- 01] 38 sequences; 20,321,374 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq23 233 2e-56 >seq23 Length=148841 Score = 233 bits (258), Expect = 2e-56 Identities = 424/617 (69%), Gaps = 10/617 (2%) Strand=Plus/Minus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||| | |||||| || || ||| ||||||||| ||| | || |||| ||| || Sbjct 122120 TACTTCGGCTTCAAGACGCTCGAGCGGTCGTACCTACTCCGCCTCGACGGCAAGGTGGCC 122061 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATG--C 93841 ||||||||||| || |||| ||||||||||| |||| || |||||| ||||||| | Sbjct 122060 GAGCGACCGCAGCACATGCTCATGCGCGTCGCGGTCGGCATCCACGGCGACGACATTGAC 122001 Query 93842 CGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCCACCC 93898 || | | | | | || |||| ||| | |||| ||| || | | Sbjct 122000 CGC--GCCATCGAGACGTACAATCTCATGTCGGA---GCGGTACTTTACGCACGCGTCGC 121946 Query 93899 CGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGA 93958 |||| || |||||||| || || ||| || ||| | || ||||| ||||| | |||| Sbjct 121945 CGACGCTCTTCAACGCCGGCACGCCGCACCCGCAGCTCTCGTCGTGCTTCCTCGTTACGA 121886 Query 93959 ACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAA 94018 |||| |||||| ||| || || | ||||| |||||| |||||| |||||| | Sbjct 121885 TGAAGGACGACTCGATCGAGGGCATCTACGACACGCTCAAGACGTGTGCGCTCATCTCCA 121826 Query 94019 AATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCC 94078 | || || || ||||| || ||||| | | || || | || || |||||| Sbjct 121825 AGACTGCAGGCGGCATCGGTCTCTCGATCCACAATATCCGCGCGACCGGCTCGTACATCG 121766 Query 94079 GCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGG 94138 ||| || || ||| ||| |||||| || |||| |||||||| || | ||||||| ||| Sbjct 121765 CCGGCACGAACGGCTACTCGAACGGCATCATCCCCATGCTCCGCGTGTACAACAACACGG 121706 Query 94139 CGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGC 94198 |||||||||| |||||||| || | | | || | ||||| |||| ||||||| Sbjct 121705 CGCGCTACGTCGACCAGGGAGGCAACAAGCGCCCTGGCGCGTTCGCCATCTACCTCGAGC 121646 Query 94199 CCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGG 94258 | |||||||| ||| | | ||| ||||||| || |||||||||||||| || || Sbjct 121645 CGTGGCACGCCGACATTTTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGG 121586 Query 94259 AGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCG 94318 | || | ||| | |||| || || ||| | || ||||| || ||| | || |||| Sbjct 121585 TCCGTGCGCGCGACTTGTTCTTTGCGCTGTGGATTCCCGACCTCTTCATGGAGCGTGTCG 121526 Query 94319 AGAAAAACTCCGCCTGG 94335 || | ||| || |||| Sbjct 121525 AGCAGAACGGCGACTGG 121509 Score = 138 bits (152), Expect = 1e-27 Identities = 222/311 (71%), Gaps = 6/311 (2%) Strand=Plus/Minus Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 || || ||||| || || || || |||||||| ||| ||||||| ||||||| || Sbjct 120600 GCGCCGATGCCGACCGCGTCGACCAGCCAGATCCTCGGCTTCAACGAGGCGTTCGAGCCG 120541 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 | ||| |||||| | |||| | | || || |||||||| || |||| ||| ||||| Sbjct 120540 TACACGTCCAACATCTACACCCGCCGCGTCCTCGCCGGCGAGTTCCAGGTCGTCAACCCC 120481 Query 95224 CACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACT 95282 ||||| || ||||| | || | | || ||||| ||| | | |||||| | Sbjct 120480 TGGCTCCTCCGCGACCTCGTCGAC-CGCGGCCTGTGGAACGACGCGATGAAGAACACGAT 120422 Query 95283 GCTACGCGC-CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGC 95341 | ||||| |||||||||| |||||||| | || || || || || ||||| ||| Sbjct 120421 CAT-CGCGCACAACGGCTCCATCCAGAACGTTCCCGGCATCCCCGACGAGCTCAAG-CGC 120364 Query 95342 -TCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGC 95400 ||||||||||||||||||||||| ||||| || | |||||| ||| |||| |||| Sbjct 120363 ATCTACAAGACCGTGTGGGAGATCTCGCAGAAGGTCGTCATCGACCTCGCCGCCGACCGC 120304 Query 95401 GGGCCCTTCAT 95411 || | ||||| Sbjct 120303 GGCGCGTTCAT 120293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722965006480