Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03- 01] 38 sequences; 20,321,374 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq6 100 3e-16 seq4 84.2 2e-11 >seq6 Length=1276814 Score = 100 bits (110), Expect = 3e-16 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || ||| | ||||| ||||||||||| || |||||||| || || || ||||| Sbjct 942159 TGCTTGCCCGCGAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATC 942218 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || |||| || | || | ||||||||||||||||| ||||| || | || ||||| Sbjct 942219 TTGGCCTTGA-CGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTGCC 942277 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || || || ||||| ||||| Sbjct 942278 GGTGAGGGTCTTGACGAAAATCTGCAT 942304 >seq4 Length=1405664 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||||||||| | || ||| || || || || || || || ||||| || || ||| Sbjct 913955 ATACCTCCGCGGAGACGCAGCACGAGGTGGAGGGTCGACTCTTTCTGGATGTTGTAGTCG 913896 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 |||| || | || || | || || || ||| | ||||| || |||||||| || Sbjct 913895 CTGAGCGTGCGACCGTCCTCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGGTCGGGA 913836 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || || || || || || || || |||| || | ||||||||| ||||| Sbjct 913835 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGACGACTCA 913776 Query 45291 ACTTCGAGAGT 45301 || |||||||| Sbjct 913775 ACCTCGAGAGT 913765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002985298480