Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03-
01] 38 sequences; 20,321,374 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq11 271 1e-67
seq7 143 3e-29
seq8 136 5e-27
>seq11
Length=953955
Score = 271 bits (300), Expect = 1e-67
Identities = 638/959 (67%), Gaps = 7/959 (1%)
Strand=Plus/Plus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
|| || || | ||||||||| ||||| | || ||||| ||||| ||||| || |||||
Sbjct 735145 TCGCCGGTGAGGATGGCGGCCTGGACGGCGGCACCGTACGCGACGGCCTCGTCCGGGTTG 735204
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|||| || || | || || ||| || | || || | | | || | ||||
Sbjct 735205 ATCGACTTGTTGGGCTCCTTGCCGCCGAAGAAGTCGGAAACGAGCTTCTGGACACGCGGG 735264
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || ||||| || ||||| | || || || | || | || |||||||| |||
Sbjct 735265 ATACGGGTCGAGCCGCCGACGAGGACAATCTCGTGGACCGACTGCTTGTCGATCTTCGAG 735324
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTC 7248
|| || || || ||||| || ||||| | | | ||||| | |||| || || ||
Sbjct 735325 TCGCGGAGGACCTTCTCGACGGGCTCCAT-CGTCGAGCGGAAGAGGTCCTGGCAAAGCTC 735383
Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308
||| || || || ||||| || || || || || || | ||| ||| | | ||| || ||
Sbjct 735384 CTCGAAGCGGGCGCGGGTGATCGAGGTGTAAAAGTCGATGCCCTCGAAGAGCGAGTCGAT 735443
Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368
|| ||||| || || || | ||| || | || ||||| |||||||| || || || ||
Sbjct 735444 CTCGATGGTGGTCTGGGCGGCCGACGAGAGGGTGCGCTTGGCGCGCTCGCAGGCGGTGCG 735503
Query 7369 TAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428
| ||| || ||||| || | ||| || | || ||||| | || || || |||||
Sbjct 735504 GAGACGGCGGAGGGCGCGGGCGTTCGACGAGAGGTCCTTCTTGTTCTTGCGCTTGAACTC 735563
Query 7429 TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488
| ||||| | ||| | || || || ||||| || | ||| || || ||
Sbjct 735564 GGCGACAAAGTGGTTGACGAGGCGGTTGTCAAAGTCCTCACCGCCGAGGTGGGTGTCTCC 735623
Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548
||||| || ||||| || ||||| || | || ||| | | | ||| || || |||||
Sbjct 735624 GGCGGTGGCCTTGACCTCGAAGATGCCCTCCTCGATGGTGAGGAGCGAGACGTCGAACGT 735683
Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACC 7608
|| || |||| ||| || ||||| |||||| | ||| | || ||||| ||||| ||
Sbjct 735684 GCCTCCTCCCAAGTCGAAGATGAGGACGTTCTTCTCGCCCTCGGACTTCTTGTCGAGGCC 735743
Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668
||||||||| || || || || || || || || || || || ||| ||||| | ||
Sbjct 735744 GTACGCGATGGCGGCGGCGGTGGGCTCGTTGATGATGCGGAGGACGTTGAGGCCTGAGAT 735803
Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728
| || || || || || || || ||||| ||||| |||||||| || || || ||
Sbjct 735804 CAAGCCGGCGTCCTTGGTGGCCTGGCGCTGCGAGTCGTTGAAGTAGGCGGGAACGGTGAC 735863
Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788
||| |||| | ||| | ||||| || | || || | || ||||| ||| ||
Sbjct 735864 GACGGCGTTGGCGACCGTGCCGCCGAGGTAGGCCTCGGCCGTCTCCTTCATCTTGAGGAG 735923
Query 7789 AACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTC 7848
|||||||| || ||||| || | || |||| ||| || || || | || ||
Sbjct 735924 GACCATCGACGAGATCTCCTCGGGCGTGAACTCCTTCTGCTCGCCCTTGTACTCGACCGA 735983
Query 7849 AATCATGGGTTTATCCGCAGCAC-CGGGGATAACCTTATACGACCAATCTTTCATATCGT 7907
|| ||||| || ||| || | ||| ||||| ||| ||| | ||||| |||
Sbjct 735984 GATGATGGGCTTGCCCG----ACTTGTCGATGACCTTGAACGGCCAGTGCTTCATGTCGG 736039
Query 7908 CTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTG 7966
||||||| ||| | |||||| | ||||| || ||||| || || || || |||
Sbjct 736040 ACTGGACCTCGGCGTCGGCAAACTTGCGGCCGATGAGGCGCTTGGCGTCGAAGACGGTG 736098
>seq7
Length=1219073
Score = 143 bits (158), Expect = 3e-29
Identities = 420/641 (66%), Gaps = 12/641 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || || || || || | ||| || || || ||||| || |||||| || | |||
Sbjct 611559 TCAAAGTCCTCGCCGCCGAGGTGGGTGTCACCGGCGGTGGCGAGGACTTCGAACACACCG 611500
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | | || || || ||||| || || || ||||| | | || | |
Sbjct 611499 TCGTCGATGGAGAGGAGGGAGACGTCGAACGTGCCGCCGCCGAGGTCGTAGACGATGATG 611440
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| || | | |||| ||||| ||||||||||| || || ||||| || ||
Sbjct 611439 TTGCGCTCGCCGCC---GGTCTTGTCGAGTCCGTACGCGATCGCGGCGGCCGTCGGCTCG 611383
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | | || || ||| || || || || || | || || || || || || ||
Sbjct 611382 TTGACGACGCGGAGGACGTTGAGACCGGCGATCGTGCCGGCGTCCTTGGTGGCCTGGCGC 611323
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| | ||||| |||||||||||||| || ||||| |||| |||||| || | |||||
Sbjct 611322 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGCGTGACCTTGGTTCCGAGG 611263
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|||| || || | || ||||| ||| || ||||| | || | ||| || | ||
Sbjct 611262 TACGTCTCGGCCGTCTCCTTCATCTTGCCGAGGACCATGGCCGAGACCTCCTCGGGCGTG 611203
Query 7817 AAC-TGTT--TCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873
||| | || || | || ||| | | || || |||| ||| | | || | |||
Sbjct 611202 AACGTCTTGCTCTTGTCGCCG---ACCTTGACCTCGATCACGGGCTGCTTCGTCGTGCCG 611146
Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933
| | ||||| ||| | | |||| ||| ||||||| | ||| |||
Sbjct 611145 GCCTTGACCTTGAACGGGTAGTGCGTCATGTCGCGCTGGACCTCCTTGTCGTCAAAGCGG 611086
Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993
| |||||| || ||||| || ||||| | ||||| | |||||| ||| ||||||
Sbjct 611085 CGTCCGATCAGGCGCTTGGCGTCAAAGATCGTGTTGGTCGGGTTCGAGGCGTACTGGTTC 611026
Query 7994 TTCGCCGCGTCCCCGATAAGACGTT--CATTATTTTCCGTA-AACGCGACGTACGATGGG 8050
|| || ||||| ||||| || || | | || | | || |||||||| || |||
Sbjct 611025 TTGGCGGCGTCGCCGATCAGGCGCTCGCCGGATGGAGGGGAGAAGGCGACGTAGGACGGG 610966
Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCG 8091
|| | || || || |||||||| || || || || |||||
Sbjct 610965 GTGATGCGGTTGCCCTGGTCGTTGGCGATGATCTCGACGCG 610925
>seq8
Length=1204811
Score = 136 bits (150), Expect = 5e-27
Identities = 488/756 (65%), Gaps = 19/756 (3%)
Strand=Plus/Plus
Query 7013 CCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATC 7072
|| || | || |||||| ||||| | || ||||| ||||| ||||| |||||||| |||
Sbjct 161782 CCGGTGAGGACGGCGGCCTGGACGGCGGCACCGTACGCGACGGCCTCGTCGGGGTTGATC 161841
Query 7073 GTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATT 7132
| || || || | ||| || | || || | | || || || |||||
Sbjct 161842 GACTTGTTGAGCTGGCGGCCGCCGAAGAACTCGGAGACGAGCGACTGGATCTTGGGGATA 161901
Query 7133 CGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT 7192
|| ||||| |||||||| | ||||| || | || || || || |||||||| | |||
Sbjct 161902 CGAGTCGAGCCACCGACGAGGACGATGTCGTCAACCTTGGACTTGTCGATCTTGGCGTCC 161961
Query 7193 CGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTC--CT 7250
|| ||||| || || | ||||| ||| | | || ||
Sbjct 161962 TTGAGGACACGCTCGACGGGGTCGAGGGTCGAGCGGAAG--GTCGCGGCGTTGATCTCCT 162019
Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310
| || || ||||| | || || | |||| || ||| | | | | ||| || | |
Sbjct 162020 CGAAGCGGGCACGCGAGATCGAGGCCGAGAAGTCCTGGCCCTGGAAGAGCGAGTCGACCT 162079
Query 7311 CAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368
| | ||| || || || || || || | || ||||| || ||||| ||||||| ||
Sbjct 162080 CGACGGTGGTCTGGGTGACG--GACGAGAGGGTGCGCTTGGCACGCTCGCACGCCGAGCG 162137
Query 7369 TAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428
| ||| || || || || | || || || || || ||| || || | ||||||
Sbjct 162138 GAGACGGCGGAGCGCGCGGGCGTCGCCCGAGATGTCGAGCTTGGTCTTGCGCTCAAACTC 162197
Query 7429 TTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCC 7487
| |||||| |||| |||| | || || || |||||||| | ||| || || |
Sbjct 162198 CTTCTTGAAGTGCTCGA-GGAGCGTGTTGTCAAAGTCCTCACCACCAAGGTGGGTGTCTC 162256
Query 7488 CCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACG 7547
| || ||||| ||||| |||||| || || || | | ||| ||||| ||||
Sbjct 162257 CGGCCGTCGCCTTGACGGCAAAGACGCCACCGGTGATCGAGAGGAGCGAGACATCGAACG 162316
Query 7548 TACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT-------CGTCTTTGTT--CT 7598
| || || || ||||| || ||||| || || | || | | ||| || ||
Sbjct 162317 TGCCGCCTCCGAGGTCGAAGATGAGGACAATCTTCTCCTTCTTCGACTTCTCGGTCGCCT 162376
Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658
|||||||||||||||| || ||||| || || || || || || || || || |
Sbjct 162377 CGCCGAGACCGTACGCGATCGCAGCCGCGGTGGGCTCGTTGATGATGCGGAGGACGTCGA 162436
Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718
||||||| || || | || || || |||| | || ||||| ||||| |||||||| |
Sbjct 162437 GGCCAGCGATCGTGCCAGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAGGCAG 162496
Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754
||||||| | ||| || | | |||| | ||| ||||
Sbjct 162497 GGACCGTGATGACGGCCTTCTTGACCTCCTTGCCGA 162532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132498311920
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