Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03- 01] 38 sequences; 20,321,374 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq23 159 4e-34 >seq23 Length=148841 Score = 159 bits (176), Expect = 4e-34 Identities = 489/742 (66%), Gaps = 23/742 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| |||||| |||| ||||| || || || ||||| | Sbjct 122054 CCGCAGCACATGCTCATGCGCGTCGCGGTCGGCATCCACGGCGACGACATTGACCGCGCC 121995 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| | ||||| | |||| || | ||||| | || || ||||| Sbjct 121994 ATCGAGACGTACAATCTCATGTCGGAGCGGTACTTT-ACGCACGCGTCGCCGACGCTCTT 121936 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| || || || || || | || || ||||| || | | ||||| || Sbjct 121935 CAACGCCGGCACGCCGCACCCGCAGCTCTCGTCGTGCTTCCTCGTTACGATGAAGGACGA 121876 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || ||| | ||||| |||| ||| |||| ||||| | ||||| ||| || || Sbjct 121875 CTCGATCGAGGGCATCTACGACACGCTCAAGACGTGTGCGCTCATCTCCAAGACTGCAGG 121816 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT--ATTAGAGGTACA 111908 || ||||| | ||||| || || | || | | | ||||| || || || Sbjct 121815 CGGCATCGGTCTCTCGATCCACAATATCCGCGCGACC--GGCTCGTACATCGCCGGCACG 121758 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || || | || | || || || || ||||| ||||| | ||| ||| |||||||| Sbjct 121757 AACGGCTACTCGAACGGCATCATCCCCATGCTCCGCGTGTACAACAACACGGCGCGCTAC 121698 Query 111969 GTAAACCAAGCTGGGCGTC-GCAAG------GGATCTATCGCAGTCTATCTTGAGCCATG 112021 || |||| ||| | | |||| || | |||| |||| || ||||| || Sbjct 121697 GTCGACCA----GGGAGGCAACAAGCGCCCTGGCGCGTTCGCCATCTACCTCGAGCCGTG 121642 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 |||||| || || | |||||||| || | || ||||| || | ||||||| | Sbjct 121641 GCACGCCGACATTTTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGG-TCC 121583 Query 112082 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 |||| ||||| | |||| || || |||||||| || ||||||||| || | || ||| Sbjct 121582 GTGCGCGCGACTTGTTCTTTGCGCTGTGGATTCCCGACCTCTTCATGGAGCGTGTCGAGC 121523 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 ||| ||| | ||| | ||||| || || | | |||| ||||| ||| ||| | | | Sbjct 121522 AGAACGGCGACTGGCCCCTCTTCTGCCCTGCCGAGGCGCCCGGACTCCACGAGGTCTACG 121463 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG-ACG 112259 |||| ||||| | | |||| | ||||||||| | || |||| || | ||| || Sbjct 121462 GTGACGAGTTCAAGGAGCTCTTCGAGAAGTACGAGAAGGAGGGTCGCGCCA-AGCGCACC 121404 Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318 ||||| || | || | | ||| | || | ||| || | || |||||| || | || Sbjct 121403 GTGCCCGC-ACAGAAGCTCTGGTACGCCGTCCTCGAGGCCCAGGTCGAGACGGGCAACCC 121345 Query 112319 ATATATGCTTTACAAAGACGCC 112340 | ||||| ||||| |||||| Sbjct 121344 CTTCATGCTCTACAAGGACGCC 121323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742105147360