Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03-
01] 38 sequences; 20,321,374 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq18 125 8e-24
>seq18
Length=451624
Score = 125 bits (138), Expect = 8e-24
Identities = 262/385 (68%), Gaps = 9/385 (2%)
Strand=Plus/Minus
Query 11591 CGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTT---GG 11647
|||| |||||||| || ||| |||||||||| |||| || ||||| ||||| |
Sbjct 187398 CGAAGCCGTCCATCTCGACGAGGAGCTGGTTGAGCGTCGACTCGCGCTCGTCGTTACCGC 187339
Query 11648 AGGGCATACCACC--TGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATAC 11705
| | || || | || ||| ||| |||| ||||||||||| |||||||| |
Sbjct 187338 CGAACTGTCCGCCCTTTCC--ACGGGCCTTTCCGATCGCGTCAATCTCGTCGATGAAGAT 187281
Query 11706 GATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAAC 11765
||| ||||| ||| ||||| ||| || || || ||||| | || || ||
Sbjct 187280 GATGCACGGCGCGTTCTTCTTGGCCTGGGTGAAGAGGTCGCGGACACGGCTGGCACCGAC 187221
Query 11766 ACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACT 11824
||| ||||||||||| ||||| | | | | ||| || || | |||||| || | |
Sbjct 187220 ACCGACGAACATCTCGACGAACTCCGAGCCGGAA-ACGGAGAGGAAGGGGACGCCGGCTT 187162
Query 11825 CACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGG 11884
| || ||| | ||| |||||||| ||||| || || || || | || | ||| | |
Sbjct 187161 CTCCTGCGGTCGCTTTGGCGAGGAGCGTCTTGCCGGTTCCGGGAGGGCCGGAGAGGATAG 187102
Query 11885 CGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCA 11944
|||| || ||||||||||| || | |||| | || || || |||||||| | |
Sbjct 187101 CGCCGCGAGGGATCTTGGCGCCGAGGCGCTCGTAGTGTTCGGGGTTTTTGAGGAACTTGA 187042
Query 11945 CAATCTCCTCAAGTTCCTCCTTGGC 11969
||| |||| || |||||||||||
Sbjct 187041 CAAACTCCATAATCTCCTCCTTGGC 187017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975720236400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |