Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03- 01] 38 sequences; 20,321,374 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq18 125 8e-24 >seq18 Length=451624 Score = 125 bits (138), Expect = 8e-24 Identities = 262/385 (68%), Gaps = 9/385 (2%) Strand=Plus/Minus Query 11591 CGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTT---GG 11647 |||| |||||||| || ||| |||||||||| |||| || ||||| ||||| | Sbjct 187398 CGAAGCCGTCCATCTCGACGAGGAGCTGGTTGAGCGTCGACTCGCGCTCGTCGTTACCGC 187339 Query 11648 AGGGCATACCACC--TGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATAC 11705 | | || || | || ||| ||| |||| ||||||||||| |||||||| | Sbjct 187338 CGAACTGTCCGCCCTTTCC--ACGGGCCTTTCCGATCGCGTCAATCTCGTCGATGAAGAT 187281 Query 11706 GATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAAC 11765 ||| ||||| ||| ||||| ||| || || || ||||| | || || || Sbjct 187280 GATGCACGGCGCGTTCTTCTTGGCCTGGGTGAAGAGGTCGCGGACACGGCTGGCACCGAC 187221 Query 11766 ACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACT 11824 ||| ||||||||||| ||||| | | | | ||| || || | |||||| || | | Sbjct 187220 ACCGACGAACATCTCGACGAACTCCGAGCCGGAA-ACGGAGAGGAAGGGGACGCCGGCTT 187162 Query 11825 CACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGG 11884 | || ||| | ||| |||||||| ||||| || || || || | || | ||| | | Sbjct 187161 CTCCTGCGGTCGCTTTGGCGAGGAGCGTCTTGCCGGTTCCGGGAGGGCCGGAGAGGATAG 187102 Query 11885 CGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCA 11944 |||| || ||||||||||| || | |||| | || || || |||||||| | | Sbjct 187101 CGCCGCGAGGGATCTTGGCGCCGAGGCGCTCGTAGTGTTCGGGGTTTTTGAGGAACTTGA 187042 Query 11945 CAATCTCCTCAAGTTCCTCCTTGGC 11969 ||| |||| || ||||||||||| Sbjct 187041 CAAACTCCATAATCTCCTCCTTGGC 187017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975720236400