Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03- 01] 38 sequences; 20,321,374 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq23 143 3e-29 >seq23 Length=148841 Score = 143 bits (158), Expect = 3e-29 Identities = 489/749 (65%), Gaps = 21/749 (3%) Strand=Plus/Plus Query 106575 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAA 106634 ||||| || ||||||||||||||| |||| | |||||||| ||| | || ||| | Sbjct 121316 TGTTGGCGGCGTCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGA 121375 Query 106635 TTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 106693 || | ||| | | || | | | || || || ||||| || |||||| ||||||| Sbjct 121376 CGGCGTACCAGAGCTTCTGTG-CGGGCACGGTGCGCTTGGCGCGACCCTCCTTCTCGTAC 121434 Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753 || | |||| | | ||||| ||||| | ||| ||| || || |||| | | Sbjct 121435 TTCTCGAAGAGCTCCTTGAACTCGTCACCGTAGACCTCGTGGAGTCCGGGCGCCTCGGCA 121494 Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813 || ||||| || | ||| | || || ||| || |||| |||||| ||||| |||||| Sbjct 121495 GGGCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGAATC 121554 Query 106814 CACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872 ||||| | | || | || | ||| || |||| || | || ||||| || | Sbjct 121555 CACAGCGCAAAGAACAAGTCGCGCGCACGGA-CCTCCTCCTTGCCGTGGTTCTTGCGGAG 121613 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 106926 || |||||||| | || || |||||||| ||||| || |||| |||| || Sbjct 121614 GTCGAGGAACTCGAAAATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCAGG 121673 Query 106927 TCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985 | ||| | | | ||| || | || |||||||| ||| ||| | ||||| |||| Sbjct 121674 GCGCTTGTTGCCTCCC----TGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCA 121729 Query 106986 TTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCT 107043 | || || || || | || | || || || || ||| |||||| | || | Sbjct 121730 TGGGGATGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTACGAG--CCGGTCGCGCG 121787 Query 107044 CACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGT 107103 | || ||||| | || || || || || ||| ||||| |||||||| | | Sbjct 121788 GATATTGTGGATCGAGAGACCGATGCCGCCTGCAGTCTTGGAGATGAGCGCACACGTCTT 121847 Query 107104 AAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGA 107163 || || | ||||| || | ||| ||||| ||||| | | | |||||||| || Sbjct 121848 GAGCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATCGTAACGAGGAAGCACGACGA 121907 Query 107164 CATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC 107223 | |||||| || || || || |||||||| || || | ||||| | || |||| Sbjct 121908 GAGCTGCGGGTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGT-AAAGTACC 121966 Query 107224 -TTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 107282 | ||||| | ||| ||||| | | | |||||||| || ||||||||||||| Sbjct 121967 GCTCCGACATGAGATTGTACGTCTCGATGGCGCGGTCAATGTCGTCGCCGTGGATGCCGA 122026 Query 107283 TGGCCACACGCATAAACATGTATTGGGGT 107311 || || ||||| | ||||| || ||| Sbjct 122027 CCGCGACGCGCATGAGCATGTGCTGCGGT 122055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980519759120