Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03-
01] 38 sequences; 20,321,374 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq23 143 3e-29
>seq23
Length=148841
Score = 143 bits (158), Expect = 3e-29
Identities = 489/749 (65%), Gaps = 21/749 (3%)
Strand=Plus/Plus
Query 106575 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAA 106634
||||| || ||||||||||||||| |||| | |||||||| ||| | || ||| |
Sbjct 121316 TGTTGGCGGCGTCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGA 121375
Query 106635 TTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 106693
|| | ||| | | || | | | || || || ||||| || |||||| |||||||
Sbjct 121376 CGGCGTACCAGAGCTTCTGTG-CGGGCACGGTGCGCTTGGCGCGACCCTCCTTCTCGTAC 121434
Query 106694 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 106753
|| | |||| | | ||||| ||||| | ||| ||| || || |||| | |
Sbjct 121435 TTCTCGAAGAGCTCCTTGAACTCGTCACCGTAGACCTCGTGGAGTCCGGGCGCCTCGGCA 121494
Query 106754 GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 106813
|| ||||| || | ||| | || || ||| || |||| |||||| ||||| ||||||
Sbjct 121495 GGGCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGAATC 121554
Query 106814 CACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872
||||| | | || | || | ||| || |||| || | || ||||| || |
Sbjct 121555 CACAGCGCAAAGAACAAGTCGCGCGCACGGA-CCTCCTCCTTGCCGTGGTTCTTGCGGAG 121613
Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 106926
|| |||||||| | || || |||||||| ||||| || |||| |||| ||
Sbjct 121614 GTCGAGGAACTCGAAAATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCAGG 121673
Query 106927 TCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985
| ||| | | | ||| || | || |||||||| ||| ||| | ||||| ||||
Sbjct 121674 GCGCTTGTTGCCTCCC----TGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCA 121729
Query 106986 TTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCT 107043
| || || || || | || | || || || || ||| |||||| | || |
Sbjct 121730 TGGGGATGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTACGAG--CCGGTCGCGCG 121787
Query 107044 CACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGT 107103
| || ||||| | || || || || || ||| ||||| |||||||| | |
Sbjct 121788 GATATTGTGGATCGAGAGACCGATGCCGCCTGCAGTCTTGGAGATGAGCGCACACGTCTT 121847
Query 107104 AAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGA 107163
|| || | ||||| || | ||| ||||| ||||| | | | |||||||| ||
Sbjct 121848 GAGCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATCGTAACGAGGAAGCACGACGA 121907
Query 107164 CATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC 107223
| |||||| || || || || |||||||| || || | ||||| | || ||||
Sbjct 121908 GAGCTGCGGGTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGT-AAAGTACC 121966
Query 107224 -TTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 107282
| ||||| | ||| ||||| | | | |||||||| || |||||||||||||
Sbjct 121967 GCTCCGACATGAGATTGTACGTCTCGATGGCGCGGTCAATGTCGTCGCCGTGGATGCCGA 122026
Query 107283 TGGCCACACGCATAAACATGTATTGGGGT 107311
|| || ||||| | ||||| || |||
Sbjct 122027 CCGCGACGCGCATGAGCATGTGCTGCGGT 122055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980519759120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |