Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03- 01] 38 sequences; 20,321,374 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq23 205 2e-47 seq4 91.5 3e-13 >seq23 Length=148841 Score = 205 bits (226), Expect = 2e-47 Identities = 544/819 (66%), Gaps = 23/819 (3%) Strand=Plus/Plus Query 221819 TTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATC 221878 ||||| ||||||||||||||||| ||||| ||| ||||| | ||| ||| | || | Sbjct 121318 TTGGCGGCGTCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGACG 121377 Query 221879 TTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATA 221937 || |||||| | |||| ||| ||| || | |||| | |||||| ||| | | Sbjct 121378 GCGTACCAGAGCT-TCTGTGCGGGCACGGTGCGCTTGGCGCGACCCTCCTTCTCGTACTT 121436 Query 221938 CCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCT-GG 221996 | || ||||| | |||| |||||||| |||||| || || || | ||| || Sbjct 121437 CTCGA---AGAGCTCCTTGAACTCGTCACCGTAGACCTCGTGGAGTCCGGG-CGCCTCGG 121492 Query 221997 CGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGA 222056 | || || | || ||||| ||| | | ||| | || |||||||||||| || | Sbjct 121493 CAGGGCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGAA 121552 Query 222057 TCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCA 222116 |||||||||| || | || | | || ||||||| ||||| ||| || | | Sbjct 121553 TCCACAGCGCAAAGAACAAGTCGCGCGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGGA 121612 Query 222117 GATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGG 222176 | || | ||||| |||||||| |||||||||||||| || |||| ||| | ||||| | Sbjct 121613 GGTCGAGGAACTCGAAAATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCAG 121672 Query 222177 GTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCG 222236 | ||||||||||| ||||| || || | | || |||| | | ||| || | | Sbjct 121673 GGCGCTTGTTGCCTCCCTGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGG 121732 Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296 | | | ||||| || ||||| ||||| ||||||| ||||| | || Sbjct 121733 GGATGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTACG---AGCCGGTCGCGCGGA 121789 Query 222297 TACTG-GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGA 222353 || || | | || | ||||| || || || || ||||| | || || |||||| Sbjct 121790 TATTGTGGATCGAGAGACCGATGCCGCCTGCAGTCTTGGAGATGAGCGCACACGTCTTGA 121849 Query 222354 GAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACA 222413 | ||||| ||||||||| || ||||| ||||| | | | || || || ||||| | Sbjct 121850 GCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATCGTAACGAGGAAGCACGACGAGA 121909 Query 222414 TCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCC 222473 ||| | | | | | |||||| || ||||| || ||||| |||||||| | | Sbjct 121910 GCTGCGGGTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAAGTACCGCT 121969 Query 222474 TAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGG 222533 ||||| |||| ||||||||| | | | | | | |||| ||| ||||| || | | Sbjct 121970 CCGACATGAGATTGTACGTCTCGATGGCGCGGTCAATGTCGTCGCCGTGGATGCCGACCG 122029 Query 222534 CGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGAC-CCTTGGAGCTGGA----GAG 222588 || | |||| ||||| ||| || | ||| || | ||||| | | || ||| Sbjct 122030 CGACGCGCATGAGCATGTGCTGCGGTCGCTC----GGCCACCTTGCCG-TCGAGGCGGAG 122084 Query 222589 CAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTT 222627 |||||||| || || |||||||| || |||||||| Sbjct 122085 TAGGTACGACCGCTCGAGCGTCTTGAAGCCGAAGTAGTT 122123 >seq4 Length=1405664 Score = 91.5 bits (100), Expect = 3e-13 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 ||| |||| ||| |||||| |||||| | | |||||| | | | || |||| || Sbjct 862567 CCCTGCATTCAGAAGAAGGCCGAGTGGGCGCTCACCTGGATCT-CGGAC-GACCGCTCCG 862510 Query 25870 TTT--GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGT 25927 | | |||||||| ||||| || ||||| || || ||||||||||| ||| ||| || | Sbjct 862509 TCTTCGGCGAGCGCCTGGTCGCGTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCAT 862450 Query 25928 TTGCGGCCATCTTCTGGCTCAAGCAG 25953 | ||| ||||||||||||||||| || Sbjct 862449 TCGCGTCCATCTTCTGGCTCAAGAAG 862424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844358798720