Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03-
01] 38 sequences; 20,321,374 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq23 129 7e-25
>seq23
Length=148841
Score = 129 bits (142), Expect = 7e-25
Identities = 481/738 (65%), Gaps = 17/738 (2%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| ||||| ||||||||||||| || |||||||| | |
Sbjct 122054 CCGCAGCACATGCTCATGCGCGTCGCGGTCGGCATCCACGGCGACGACATTGACCGCGCC 121995
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| ||||| ||| | ||||| | |||| || | ||||| | || || |||||
Sbjct 121994 ATCGAGACGTACAATCTCATGTCGGAGCGGTA-CTTTACGCACGCGTCGCCGACGCTCTT 121936
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| || || || || |||||| | || |||||||| | | | ||||| ||
Sbjct 121935 CAACGCCGGCACGCCGCACCCGCAGCTCTCGTCGTGCTTCCTCGTTACGATGAAGGACGA 121876
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
||| ||| | || ||||| | || || | | |||||||| ||||| ||| || ||
Sbjct 121875 CTCGATCGAGGGCATCTACGACACGCTCAAGACGTGTGCGCTCATCTCCAAGACTGCAGG 121816
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA-TTCG-GGGGACA 75508
|| || || | ||||| || | | || | |||||| ||| || ||
Sbjct 121815 CGGCATCGGTCTCTCGATCCACAATATCCGCGCGA--CCGGCTCGTACATCGCCGGCACG 121758
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|| || | || | || || || || ||||| ||||| | ||| ||| ||||||||
Sbjct 121757 AACGGCTACTCGAACGGCATCATCCCCATGCTCCGCGTGTACAACAACACGGCGCGCTAC 121698
Query 75569 GTAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCA 75624
|| | | || | ||| ||| || | |||| ||||| | || || |||||
Sbjct 121697 GTCGA-CCAGGGAGGCAACAAGCGCCCTGGCGCGTTCGCCATCTACCTCGAGCCGTGGCA 121639
Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684
||||| || | |||||||| || | || ||||| || | || |||| || |||
Sbjct 121638 CGCCGACATTTTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGG-TCCGTG 121580
Query 75685 -TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743
| || | || | | ||||||||||| ||||| |||||| |||| || ||| ||
Sbjct 121579 CGCGCGACTTGTTCTTTGCGCTGTGGATTCCCGACCTCTTCATGGAGCGTGTCGAGCAGA 121520
Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803
|| | ||| | || ||||| || | | |||| || || ||| ||| | ||||
Sbjct 121519 ACGGCGACTGGCCCCTCTTCTGCCCTGCCGAGGCGCCCGGACTCCACGAGGTCTACGGTG 121460
Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG-ACTGTA 75862
| ||||| | | |||| | ||||| || |||||||| | ||||| ||| || ||
Sbjct 121459 ACGAGTTCAAGGAGCTCTTCGAGAAGTACGAGAAGGAGGGTCGCGCCAA-GCGCACCGTG 121401
Query 75863 CCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921
|| | | | || | | ||| | || | ||| | | ||| ||||| || | || |
Sbjct 121400 CCCG-CACAGAAGCTCTGGTACGCCGTCCTCGAGGCCCAGGTCGAGACGGGCAACCCCTT 121342
Query 75922 TATGCTTTACAAGGATGC 75939
||||| |||||||| ||
Sbjct 121341 CATGCTCTACAAGGACGC 121324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569316629440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |