Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03- 01] 38 sequences; 20,321,374 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq23 129 7e-25 >seq23 Length=148841 Score = 129 bits (142), Expect = 7e-25 Identities = 481/738 (65%), Gaps = 17/738 (2%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| ||||| ||||||||||||| || |||||||| | | Sbjct 122054 CCGCAGCACATGCTCATGCGCGTCGCGGTCGGCATCCACGGCGACGACATTGACCGCGCC 121995 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| | ||||| | |||| || | ||||| | || || ||||| Sbjct 121994 ATCGAGACGTACAATCTCATGTCGGAGCGGTA-CTTTACGCACGCGTCGCCGACGCTCTT 121936 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || || || |||||| | || |||||||| | | | ||||| || Sbjct 121935 CAACGCCGGCACGCCGCACCCGCAGCTCTCGTCGTGCTTCCTCGTTACGATGAAGGACGA 121876 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| ||| | || ||||| | || || | | |||||||| ||||| ||| || || Sbjct 121875 CTCGATCGAGGGCATCTACGACACGCTCAAGACGTGTGCGCTCATCTCCAAGACTGCAGG 121816 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA-TTCG-GGGGACA 75508 || || || | ||||| || | | || | |||||| ||| || || Sbjct 121815 CGGCATCGGTCTCTCGATCCACAATATCCGCGCGA--CCGGCTCGTACATCGCCGGCACG 121758 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || | || | || || || || ||||| ||||| | ||| ||| |||||||| Sbjct 121757 AACGGCTACTCGAACGGCATCATCCCCATGCTCCGCGTGTACAACAACACGGCGCGCTAC 121698 Query 75569 GTAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCA 75624 || | | || | ||| ||| || | |||| ||||| | || || ||||| Sbjct 121697 GTCGA-CCAGGGAGGCAACAAGCGCCCTGGCGCGTTCGCCATCTACCTCGAGCCGTGGCA 121639 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 ||||| || | |||||||| || | || ||||| || | || |||| || ||| Sbjct 121638 CGCCGACATTTTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGG-TCCGTG 121580 Query 75685 -TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | || | || | | ||||||||||| ||||| |||||| |||| || ||| || Sbjct 121579 CGCGCGACTTGTTCTTTGCGCTGTGGATTCCCGACCTCTTCATGGAGCGTGTCGAGCAGA 121520 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 || | ||| | || ||||| || | | |||| || || ||| ||| | |||| Sbjct 121519 ACGGCGACTGGCCCCTCTTCTGCCCTGCCGAGGCGCCCGGACTCCACGAGGTCTACGGTG 121460 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG-ACTGTA 75862 | ||||| | | |||| | ||||| || |||||||| | ||||| ||| || || Sbjct 121459 ACGAGTTCAAGGAGCTCTTCGAGAAGTACGAGAAGGAGGGTCGCGCCAA-GCGCACCGTG 121401 Query 75863 CCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 || | | | || | | ||| | || | ||| | | ||| ||||| || | || | Sbjct 121400 CCCG-CACAGAAGCTCTGGTACGCCGTCCTCGAGGCCCAGGTCGAGACGGGCAACCCCTT 121342 Query 75922 TATGCTTTACAAGGATGC 75939 ||||| |||||||| || Sbjct 121341 CATGCTCTACAAGGACGC 121324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569316629440