Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03- 01] 38 sequences; 20,321,374 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq23 131 2e-25 >seq23 Length=148841 Score = 131 bits (144), Expect = 2e-25 Identities = 301/444 (68%), Gaps = 17/444 (4%) Strand=Plus/Plus Query 147886 ATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCC 147942 |||||||||||||| || || | ||||| ||| | ||| || ||||| || ||| Sbjct 121630 ATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCAGGGCGCTTGTTGCCTCCC 121689 Query 147943 TGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCA 148002 |||||||| | |||| || ||||||| ||||||| | |||||| | |||| ||| | Sbjct 121690 TGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCG-A 121748 Query 148003 GT-GCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCC 148061 || |||||| ||| ||| | |||| || || | | ||| | | || Sbjct 121749 GTAGCCGTTCGTGCCGGCGATGTACGAGCCGGTCGCGCGGATATTGTGGATCGAGAGACC 121808 Query 148062 AATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATGCC 148118 |||||||| || || ||| || ||| |||||| || | | || ||||||||| Sbjct 121809 GATGCCGCCTGCAGT-CTTGGAGATG--AGCGCACACGTCTTGAGCGTGTCGTAGATGCC 121865 Query 148119 GTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGT 148178 ||||| ||||| || | || | || ||||| | | ||||| | |||| Sbjct 121866 CTCGATCGAGTCGTCCTTCATCGTAACGAGGAAGCACGACGAGAGCTGCGGGTGCGGCGT 121925 Query 148179 TCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGAT- 148237 || || ||| || || || |||||||||||| | | | |||| ||| Sbjct 121926 GCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAAGTACCGCTC---CGACATGAGATT 121982 Query 148238 --ACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAG 148295 ||||||| || ||| || |||||||||||||| ||||| | ||||||||||||||| Sbjct 121983 GTACGTCTCGATGGCGCGGTCAATGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAG 122042 Query 148296 CATGTGCTGTGGTCGTTCGGCAAC 148319 ||||||||| ||||| ||||| || Sbjct 122043 CATGTGCTGCGGTCGCTCGGCCAC 122066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610973609680