Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03-
01] 38 sequences; 20,321,374 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq23 131 2e-25
>seq23
Length=148841
Score = 131 bits (144), Expect = 2e-25
Identities = 301/444 (68%), Gaps = 17/444 (4%)
Strand=Plus/Plus
Query 147886 ATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCC 147942
|||||||||||||| || || | ||||| ||| | ||| || ||||| || |||
Sbjct 121630 ATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCAGGGCGCTTGTTGCCTCCC 121689
Query 147943 TGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCA 148002
|||||||| | |||| || ||||||| ||||||| | |||||| | |||| ||| |
Sbjct 121690 TGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGGATGATGCCGTTCG-A 121748
Query 148003 GT-GCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCC 148061
|| |||||| ||| ||| | |||| || || | | ||| | | ||
Sbjct 121749 GTAGCCGTTCGTGCCGGCGATGTACGAGCCGGTCGCGCGGATATTGTGGATCGAGAGACC 121808
Query 148062 AATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATGCC 148118
|||||||| || || ||| || ||| |||||| || | | || |||||||||
Sbjct 121809 GATGCCGCCTGCAGT-CTTGGAGATG--AGCGCACACGTCTTGAGCGTGTCGTAGATGCC 121865
Query 148119 GTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGT 148178
||||| ||||| || | || | || ||||| | | ||||| | ||||
Sbjct 121866 CTCGATCGAGTCGTCCTTCATCGTAACGAGGAAGCACGACGAGAGCTGCGGGTGCGGCGT 121925
Query 148179 TCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGAT- 148237
|| || ||| || || || |||||||||||| | | | |||| |||
Sbjct 121926 GCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGTAAAGTACCGCTC---CGACATGAGATT 121982
Query 148238 --ACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAG 148295
||||||| || ||| || |||||||||||||| ||||| | |||||||||||||||
Sbjct 121983 GTACGTCTCGATGGCGCGGTCAATGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAG 122042
Query 148296 CATGTGCTGTGGTCGTTCGGCAAC 148319
||||||||| ||||| ||||| ||
Sbjct 122043 CATGTGCTGCGGTCGCTCGGCCAC 122066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610973609680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |