Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03- 01] 38 sequences; 20,321,374 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq23 147 3e-30 >seq23 Length=148841 Score = 147 bits (162), Expect = 3e-30 Identities = 489/748 (65%), Gaps = 21/748 (3%) Strand=Plus/Plus Query 111348 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAA 111407 ||||| || ||||||||||||||| |||| | |||||||| ||| | | ||| | Sbjct 121316 TGTTGGCGGCGTCCTTGTAGAGCATGAAGGGGTTGCCCGTCTCGACCTGGGCCTCGAGGA 121375 Query 111408 TAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTAC 111466 || | ||| | | || | | | || || || ||||| || |||||| ||||||| Sbjct 121376 CGGCGTACCAGAGCTTCTGTG-CGGGCACGGTGCGCTTGGCGCGACCCTCCTTCTCGTAC 121434 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT 111526 || | |||| | | ||||| ||||| | ||| ||| || || |||| | | Sbjct 121435 TTCTCGAAGAGCTCCTTGAACTCGTCACCGTAGACCTCGTGGAGTCCGGGCGCCTCGGCA 121494 Query 111527 GGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATC 111586 || ||||| || | ||| | || | ||| || |||| |||||| ||||| |||||| Sbjct 121495 GGGCAGAAGAGGGGCCAGTCGCCGTTCTGCTCGACACGCTCCATGAAGAGGTCGGGAATC 121554 Query 111587 CACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||||| | | || | || | ||| || |||| || | || ||||| || | Sbjct 121555 CACAGCGCAAAGAACAAGTCGCGCGCACGGA-CCTCCTCCTTGCCGTGGTTCTTGCGGAG 121613 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 111699 || |||||||| | || || |||||||| ||||| || |||| |||| || Sbjct 121614 GTCGAGGAACTCGAAAATGTCGGCGTGCCACGGCTCGAGGTAGATGGCGAACGCGCCAGG 121673 Query 111700 TCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 111758 | ||| | | | ||| || | || |||||||| ||| ||| | ||||| |||| Sbjct 121674 GCGCTTGTTGCCTCCC----TGGTCGACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCA 121729 Query 111759 TTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCT 111816 | || || || || | || | || || || || ||| |||||| | || | Sbjct 121730 TGGGGATGATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTACGAG--CCGGTCGCGCG 121787 Query 111817 CACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGT 111876 | || ||||| | || || || || || ||| ||||| |||||||| | | Sbjct 121788 GATATTGTGGATCGAGAGACCGATGCCGCCTGCAGTCTTGGAGATGAGCGCACACGTCTT 121847 Query 111877 AAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGA 111936 || || | ||||| || | ||| ||||| ||||| | | | |||||||| || Sbjct 121848 GAGCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATCGTAACGAGGAAGCACGACGA 121907 Query 111937 CATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC 111996 | |||||| || || || || |||||||| || || | ||||| | || |||| Sbjct 121908 GAGCTGCGGGTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGACGCGTGCGT-AAAGTACC 121966 Query 111997 -TTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 112055 | ||||| | ||| ||||| | | | |||||||| || ||||||||||||| Sbjct 121967 GCTCCGACATGAGATTGTACGTCTCGATGGCGCGGTCAATGTCGTCGCCGTGGATGCCGA 122026 Query 112056 TTGCGACCCGCATGAACATGTACTGTGG 112083 ||||| ||||||| ||||| ||| || Sbjct 122027 CCGCGACGCGCATGAGCATGTGCTGCGG 122054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031701684800