Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhodotorula_20toruloides_20[genbank_20GCA_5F001600215.1_202016-03-
01] 38 sequences; 20,321,374 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq4 86.0 5e-12
seq9 84.2 2e-11
>seq4
Length=1405664
Score = 86.0 bits (94), Expect = 5e-12
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| ||||| ||||| || ||||| || ||||| || ||||| || || | |||||||||
Sbjct 914249 AAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAG 914308
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| | || ||| | || || |||||||||||| || || ||||||||| | ||
Sbjct 914309 CAGCTTGAGGACGGACGCACGCTTAGCGATTACAACATCCAGAAAGAGTCGACCCTCCAC 914368
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCA 27216
| || ||||| | || |||||||
Sbjct 914369 CTCGTGCTGCGTCTCCGCGGTGGCA 914393
>seq9
Length=1185843
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || || ||||| || ||||| || ||||| || ||||| || || | |||||||||
Sbjct 462393 AAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAG 462334
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| | || ||| || || |||| || |||||||| || |||||||||||| | ||
Sbjct 462333 CAGCTCGAGGACGGTCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTCCAC 462274
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| || | ||| | || ||||| ||
Sbjct 462273 CTCGTCCTCCGTCTCCGCGGTGGTAT 462248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918193413760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |