Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq150 95.1 3e-14 >seq150 Length=639408 Score = 95.1 bits (104), Expect = 3e-14 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 319804 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAA-CATCCGCAGAGGGGAA 319862 || || |||||||| ||||| || ||||| ||| | || | || | |||||||| Sbjct 39095 TCAGAACCGTCGAGGTCGTGCTCGACGTAC-CAGGTGCGAACCTCCTCGGGCGAGGGGAA 39153 Query 319863 CCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGG 319922 || || | |||||| ||| |||||||||||||| || || || || | ||||| | Sbjct 39154 GCCCTCGACCTGGCCATTCTGAATAGCGCGCATCAAAGTCGACTTGCCGGAGCCGTTGCG 39213 Query 319923 CCCACACAGACCGTAGCGGTTTCCGCGTTTCAG--GTTGAACCG-CGTGTTGTTCAGAAG 319979 ||||| ||||||||||||| || || || || | || || ||||||| || || Sbjct 39214 GCCACAGAGACCGTAGCGGTGGCCACGCTTGAGACGGAGAGTCGCCGTGTTG---AGCAG 39270 Query 319980 AATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 || || ||||||| || || || |||| ||| | || || ||||| || Sbjct 39271 GATCTTGGCACCATAGGCGAGCGAGAATTGACAGTTGCAAAGGTCCTCGCC 39321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819513834530