Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq130 407 1e-108 seq206 125 6e-24 seq125 104 2e-17 seq41 98.7 9e-16 >seq130 Length=202609 Score = 407 bits (450), Expect = 1e-108 Identities = 997/1508 (66%), Gaps = 32/1508 (2%) Strand=Plus/Minus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| ||||| || |||||||||| | || ||||| ||| | |||| ||| ||| Sbjct 61610 GGTTGACCACCTGGAACTCGCCGGCGAGCACACGGCGGGTGTAGAGGTTGCTCGTGTACG 61551 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 | || || | || ||| || || |||||| || || || ||||||||||| || | Sbjct 61550 GCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTCGTAGACGCCGTCGGCATCGGTGCGA 61491 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631 ||| |||||||||| || ||||| | | ||| || | ||||||| | |||||||| Sbjct 61490 GCAGAAGCGAGTTTCGCAGACCGTGGGTCGCAATCTTGCGCTTGAGCTCGGCCCAGTCCC 61431 Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCG 22691 |||| | ||||| ||| |||| | ||||| || | | |||| | || || | Sbjct 61430 ACAGGGAGCTGGGCGTGACAC---CCCAGAGGTCGTACTGGAGCTCGCCCTGGCTGGCTG 61374 Query 22692 GGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGC-CTCC 22750 ||||||| |||||||| |||||||| ||| | |||| ||||| | || ||| Sbjct 61373 GGCTGCCCTCGTACGTCTCGTACGGGCCAAGCTCCTTTGCAATCTCGCA-CGAGCGCTCG 61315 Query 22751 AACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTT 22810 | ||| ||| || || ||||||||||||| |||| | ||| || ||| Sbjct 61314 AGGGCGGCGTGGTAGATGGTCTCGAAGATTTGAATGTTGAGCCTCTTGGCCTCGGGGCTG 61255 Query 22811 TCGTACGGCATA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGAT 22869 ||| | ||| || | ||| |||| ||| ||||| || | ||| | || || || ||||| Sbjct 61254 TCGAA-GGCGTAGCCCATGATCATGAATGCGTCGGCAAGACCGTTGACACCAATGCCGAT 61196 Query 22870 CGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGAT 22929 || |||| || |||||| || |||||||||| ||| || | || ||||| Sbjct 61195 GGGACGGTGGCGCATGTTCGACTTCTTGGCCTCGGGCACAGGGTAGTAGTTGACGTCGAT 61136 Query 22930 TGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTA 22989 | |||||||||| ||| | || || | | ||||||||| Sbjct 61135 GATCTTGTTCAAGTTGGCACACACGACCTTGGTAACCTCGTGCAGCTTCTTAAAGTCGTA 61076 Query 22990 AACGCCCGATTGTAC----------AACAAACTTGTTGACGG---------CGATCGAGG 23030 || || ||| || | | |||| || || |||| || Sbjct 61075 --CGTCC--TTGCACCGGTCTCGGGATCCGGCTTGATGTAGGTGGGAAGCGCGATACTGG 61020 Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 | || ||||| ||||| ||||| || || ||||||| | || || || || || | Sbjct 61019 CCAGGTTGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATGATCTCCGTGCAGAGGT 60960 Query 23091 TGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGT 23150 | ||||| || ||||| | || ||||||| || || ||| | ||||||| Sbjct 60959 TCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCCTTGT 60900 Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210 |||||||| | || |||| ||||| ||| | ||||| ||| || ||| | ||| Sbjct 60899 AGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGATAGCGTACCAGAGCTTCT 60840 Query 23211 GAGCGTGAACACGT-CGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCA 23269 | || | || ||| || | || ||| || ||||||||| ||||||| || || Sbjct 60839 GGGCCTTGAC-CGTGCGGCGGGCCCGGCCCTCGCGCTCGTACTTGTGGTACAGAGCCTCG 60781 Query 23270 AATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCAC 23329 || || | || || |||||| |||||||| ||| || ||||| ||| |||| Sbjct 60780 AACTCCTCGCCATAGACGTCGGCAAGGCCGGGGCATTCGGCGGGGCACATAAGAGACCAC 60721 Query 23330 ATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGT 23389 || | || || || |||| || || ||||| ||||| ||||||||||| || Sbjct 60720 TCGCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATCCAGAGAGCGTAGAAGAGC 60661 Query 23390 TCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACG 23449 || |||||||| ||||| || ||||| |||||| | || | || || || ||| Sbjct 60660 TCACGGGCGCGGACCTCTTCCTTGCCATGGTTCTTGCGGAGGTCGAGGAACTCAAAGACG 60601 Query 23450 TCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGA 23509 |||| ||||| ||||||| ||| | |||||| || || || | ||| ||||| || || Sbjct 60600 TCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGCCGCTTGTTGCCACCTTGG 60541 Query 23510 TCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCG 23569 ||||| || | || ||||||||||| |||| ||||| ||||||| |||||||| | Sbjct 60540 TCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGCACGATGCCGTTGGAGACA 60481 Query 23570 CCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATG 23629 ||| || || | ||||| | | |||| | ||| | || || ||| ||| Sbjct 60480 CCGTTGGTACCGGCAATGTATGAACCGGTGCCACGAATGCAGTGGATGTTGAGACCGATG 60421 Query 23630 CCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATG 23689 || ||| | | || ||||| ||||| || || ||||||||||||||||||||| Sbjct 60420 CCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATGCCCTCGATG 60361 Query 23690 CTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCC 23749 ||| || || | | ||| | ||| || || |||||||||| ||||| || |||| Sbjct 60360 GAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACATTTGCGGGTTGGGTGTGCCGGCA 60301 Query 23750 GAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCG 23809 ||| || ||||| ||| || || ||||| | |||||| | ||||| || || Sbjct 60300 TTGAAGAGCGTCGGCGAGGCATGGGTGAAGTACTTCTCCGACATCAAGTTGTATGTCTCA 60241 Query 23810 ATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGA 23869 || || || ||||| | ||||| ||||||| || || ||||| | ||||| ||| Sbjct 60240 ATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAGCAACACGCATGAGCATGTGCTGA 60181 Query 23870 GGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAAT 23929 || |||||| || |||||| || ||| ||| || || || | | || || ||| Sbjct 60180 GGCCTCTCGGCCACCTTGCCGTTGATCCTGAGCAGGTACGAGCGCTCGAGGGTCTTGAAT 60121 Query 23930 CCAAAATA 23937 || || || Sbjct 60120 CCGAAGTA 60113 >seq206 Length=170121 Score = 125 bits (138), Expect = 6e-24 Identities = 341/518 (66%), Gaps = 18/518 (3%) Strand=Plus/Minus Query 57879 CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATC 57935 || ||| |||| || || || || |||| ||| |||| ||||| || ||| | || Sbjct 151698 CTCTTCGACGCCATTGAGACCATCCCCG---TCGTCAAGCAGAAGGCCGACTGGGCTCTC 151642 Query 57936 AAATGGATAAAAAGCGCCACGGCC---ACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCC 57992 |||||| || ||||| | |||||||| ||| | || | || || || ||| Sbjct 151641 CGATGGATCTC---CGACACGGACTCGACGTTCGCGGAGCGCCTCGTTGCCTTTGCTGCC 151585 Query 57993 GTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGC 58052 ||||| || || ||||| || ||| ||| ||| | || || ||| | ||||| ||||| Sbjct 151584 GTCGAGGGCATCTTCTTCTCCGGCTCCTTCGCGTCCATTTTCTGGCTCAAGAAGCGCGGT 151525 Query 58053 CTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACT 58112 |||||||||||||| || || ||||||| |||| || |||||||| | || || Sbjct 151524 CTGATGCCCGGCCTCACCTTCTCCAACGAGCTGATCAGCCGAGACGAGGGCTTGCACACC 151465 Query 58113 GATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTG 58172 || ||||| ||||| ||| | ||| | || || | ||| | || | Sbjct 151464 GACTTTGCCTGCCTCCTGTTCAGCCACCTCCGAAAGCGGCCCCACCCGGACGTCGTCCTC 151405 Query 58173 GACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTG 58232 ||| ||||||||||| || | ||||| | | || ||||||| || || || || Sbjct 151404 CGCATCATCACCGAGGCTGTGACCATCGAGCAGGCCTTCCTCACCGACGCGCTCCCCGTC 151345 Query 58233 GCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGA 58292 | | |||| |||||| | ||| ||||||| ||||| ||||||||| | Sbjct 151344 TCGCTCATCGGCATGAACTCGCGGCTCATGAGCCAGTACATCGAGTTCGTTGCCGACCGC 151285 Query 58293 CTTTTGCTCGAACTGATTGG---AGAGCGTCATTACAACACGAAAAATCCGTTTGATTTT 58349 | |||||| | | || || || |||||| ||| || ||||| || ||| Sbjct 151284 C---TGCTCGTTTCGCTCGGCAACGACAAGCACTACAACGCGAGCAACCCGTTCGACTTT 151228 Query 58350 ATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTT 58387 ||| | ||||| | |||||||||| ||||| || Sbjct 151227 ATGGAGAACATCTCTTTGCAGGGCAAGACGAACTTCTT 151190 >seq125 Length=635640 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || || || ||||| || |||||||| ||||||||| |||| || || | Sbjct 378383 AAGATGCAGATCTTTGTCAAGACGCTCACAGGCAAGACGATCACCCTCGAGGTCGAGTCC 378442 Query 31250 TCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||| | || | ||||| || ||| | ||||||||| ||| | ||||| || Sbjct 378443 GGCGACACCATTGACAACGTCAAGACCAAGA-TCCAGGACAAGGAGGGCATCCCGCCAGA 378501 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || || || ||||| ||| | |||||| || || ||| || Sbjct 378502 CCAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAAGACGGCCGCACCTTGGCCGACTA 378561 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || || || ||||| || || Sbjct 378562 CAACATCCAGAAGGAGTCCACCCTCCATCTCGTCCT 378597 >seq41 Length=375347 Score = 98.7 bits (108), Expect = 9e-16 Identities = 145/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 31204 CGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGA 31263 ||| ||||| || || ||||| ||||||||| |||| || || || |||| |||| Sbjct 19440 CGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTGGAGTCGGGGGACACCATCGA 19499 Query 31264 AACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | ||||| || ||| | ||||||||| ||| | || || ||||||||||| || | Sbjct 19500 CAATGTCAAGACCAAGATTCA-GGACAAGGAGGGCATCCCCCCAGACCAGCAGCGGCTGA 19558 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | ||||| ||||| ||| | || ||| || || ||| || ||||| || || | Sbjct 19559 TCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACACTGGCCGACTACAACATCCAGAAGG 19618 Query 31383 AATCGACTCTTCATCTGGTACTT 31405 | ||||| ||||| || |||||| Sbjct 19619 AGTCGACCCTTCACCTTGTACTT 19641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764555641520