Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq125 82.4 6e-11 >seq125 Length=635640 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42906 ATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTG 42965 ||||| ||| |||||| || | ||||| |||| ||| || || |||| || | || Sbjct 378589 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTG 378530 Query 42966 TTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAA 43025 ||||||||||| || | ||||| || || | ||| | || || || || |||| Sbjct 378529 CTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGGATCTT 378470 Query 43026 CTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGT 43085 ||||| || ||| |||||||| | |||||| || | || || || || || || Sbjct 378469 GGTCTTGACGTTGTCAATGGTGTCGCCGGACTCGACCTCGAGGGTGATCGTCTTGCCTGT 378410 Query 43086 TAGAGTTTTCACAAAAATTTGCATTTTCTT 43115 || || || ||||| || ||||| || || Sbjct 378409 GAGCGTCTTGACAAAGATCTGCATCTTGTT 378380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381368061531198