Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq130 114 2e-20 >seq130 Length=202609 Score = 114 bits (126), Expect = 2e-20 Identities = 372/571 (65%), Gaps = 10/571 (2%) Strand=Plus/Minus Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 || ||||| | |||||||| || | | | ||||| ||||| || || || || ||| Sbjct 60738 GGGCACATAAGAGACCACTCGCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATC 60679 Query 72049 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 72108 || ||||| || || || | || | ||| || || || ||||| || Sbjct 60678 CAGAGAGCGTAGAAGAGCTCACGGGCGCGGACCTCTTCCTTGCCATGGTTCTTGCGGAGG 60619 Query 72109 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGC 72168 ||||||||| | | | || || ||||| || || | ||| ||||| | | || ||| Sbjct 60618 TCGAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGC 60559 Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228 || ||||| || || || || | || || |||||||| || || |||| | ||| || Sbjct 60558 CGCTTGTTGCCACCTTGGTCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGC 60499 Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--AT 72286 | || || ||||| |||| ||||| |||| || || || || ||||||| | Sbjct 60498 ACGATGCCGTTGGAGACACCGTTGGTACCGGCAATGTATGAACCGGTGCCACGAATGCAG 60439 Query 72287 TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 72346 || |||| |||| || || || || | || ||| | ||||| || | | Sbjct 60438 TGGATGTTGA--GACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAGGG 60381 Query 72347 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 72406 | || ||||||||||| || || ||| ||||| | | || || || ||||||| Sbjct 60380 TGTCGTAGATGCCCTCGATGGAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACATTT 60321 Query 72407 G-GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 72465 | | | | | || || ||||| || | || || || || || || || | || || Sbjct 60320 GCGGGTTGGGT-GTGCCGGCATTGAAGAGCGTCGGCGAGGCATGGGTGAAGTACTTCTCC 60262 Query 72466 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG--ATGTATTCCTACCG 72523 |||| | ||||| |||||||| || || | || ||||| || || || || | Sbjct 60261 GACATCAAGTTGTATGTCTCAATCGC--CTTGTCGATGTCATTGCCGTGAATACCGACAG 60204 Query 72524 CGACACGCATTAACATATGCTGAGGTCTTTC 72554 | |||||||| | ||| |||||||| || || Sbjct 60203 CAACACGCATGAGCATGTGCTGAGGCCTCTC 60173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671136423161560