Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07]
331 sequences; 18,422,451 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq130 158 2e-33
seq206 138 2e-27
>seq130
Length=202609
Score = 158 bits (174), Expect = 2e-33
Identities = 347/515 (67%), Gaps = 4/515 (1%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| ||||| | ||| ||| | ||||| |||||| || | ||||| | || |
Sbjct 60473 ACCAACGGTGTCTCCAACGGCATCGTGCCCATGCTCCGAGTCTACAACAACACCGCAAGG 60532
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
|| || || || ||||| || ||||| || || | ||| ||||| | || || |||
Sbjct 60533 TATGTCGACCAAGGTGGCAACAAGCGGCCCGGTGCCTTTGCCATCTACATCGAGCCCTGG 60592
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||| ||||||| ||||| || |||| | ||||| ||| |||| ||||||| ||
Sbjct 60593 CACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCATGGCAAGGAAGAGGTCCGC 60652
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
||| | || | || || || |||||| | || || ||||||||||||| ||| | |
Sbjct 60653 GCCCGTGAGCTCTTCTACGCTCTCTGGATCCCGGACCTGTTCATGAAGCGAGTCGAGCAG 60712
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
||| | ||| || |||||||||| | | ||||| || |||| || |||
Sbjct 60713 AACGGCGAGTGGTCTCTTATGTGCCCCGCCGAATGCCCCGGCCTTGCCGACGTCTATGGC 60772
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAGT 97165
|| ||||| ||||| |||| ||||||| ||||||| | || ||| ||
Sbjct 60773 GAGGAGTTCGAGGCTCTGTACCACAAGTACGAGCGCGAGGGCCGGGCCCGCCGCACG-GT 60831
Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
| | || | |||| || ||| | || ||| | ||||||| |||||||| | || |
Sbjct 60832 CAAGGC-CCAGAAGCTCTGGTACGCTATCCTCGAGGCTCAGACGGAGACTGGCAACCCAT 60890
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284
||| ||||||||||| | | || ||||| ||||| || | ||||||||||
Sbjct 60891 TCATGCTCTACAAGGACGCTGCCAACCGCAAGTCGAACCAGAAGAACCTCGGCACCATCA 60950
Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319
|| |||| || || |||||||| || | ||||||
Sbjct 60951 AGTGCTCGAACCTCTGCACGGAGATCATTGAGTAC 60985
>seq206
Length=170121
Score = 138 bits (152), Expect = 2e-27
Identities = 394/597 (66%), Gaps = 23/597 (4%)
Strand=Plus/Minus
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315
|||||| | ||||| || | |||||| |||||||||| ||||||||||| ||
Sbjct 151770 GAGAACATTCACTCAGAGACGTACTCGCTCCTGATTGACACCTACATTCGCGACCCTGCT 151711
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCC-GTCTATACGTAAAAAGGC 125374
||||| | || ||||| |||| || || || | || ||| | | | || |||
Sbjct 151710 CAACGCGAGTAC---CTCTTCGACGCCATTGAGACCATCCCCGTCGTCAAGCAGAA-GGC 151655
Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434
| |||| | || |||||| ||| | || ||| ||| || | || || ||
Sbjct 151654 CGACTGGGCTCTCCGATGGATCTCCGACACGGACTCGACGTTCGCGGAGCGCCTCGTTGC 151595
Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494
|| || ||||| |||||||||||||| || || || ||| |||| || ||||||||
Sbjct 151594 CTTTGCTGCCGTCGAGGGCATCTTCTTCTCCGGCTCCTTCGCGTCCATTTTCTGGCTCAA 151535
Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554
||||||||| || |||||||| || || | |||||| | || |||||||||||
Sbjct 151534 GAAGCGCGGTCTGATGCCCGGCCTCACCTTCTCCAACGAGCTGATCAGCCGAGACGAGGG 151475
Query 125555 CCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATC 125614
| | ||| ||||||||| || ||||| || | | || |||| || | |
Sbjct 151474 CTTGCACACCGACTTTGCCTGCCTCCTGTT---CAGCCACCT-----CCGAAAGCGGCCC 151423
Query 125615 CAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCT 125674
|| | || ||| || ||| | ||||| || |||| || || || | || ||
Sbjct 151422 CA-CCCGGACGTCGTCCTCCGCATCATCACCGAGGCTGTGACCATCGAGCAGGCCTTCCT 151364
Query 125675 AACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACAT 125734
||||| | || || ||| | || |||||||||| ||| ||| || |||||||
Sbjct 151363 CACCGACGCGCTCCCCGTCTCGCTCATCGGCATGAACTCGCGGCTCATGAGCCAGTACAT 151304
Query 125735 AGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAACGC 125791
||||| || || || || || || || | | | ||| || |||| ||||||||
Sbjct 151303 CGAGTTCGTTGCCGACCGCCTGCT---CGTTTCGCTCGGCAACGACAAGCACTACAACGC 151247
Query 125792 CAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTT 125848
| || || || || || ||| | ||| || | |||| ||||| ||||| ||
Sbjct 151246 GAGCAACCCGTTCGACTTTATGGAGAACATCTCTTTGCAGGGCAAGACGAACTTCTT 151190
Score = 118 bits (130), Expect = 2e-21
Identities = 180/248 (73%), Gaps = 9/248 (4%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||||||||| ||||||| || ||| |||| ||
Sbjct 152073 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCTGAGGAGATCGACTTG 152014
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||| || |||| ||||| | | | | || | |||||| | || ||
Sbjct 152013 TCCAAGGACATGCACGACTGGGACAACAGGCTCAACGACAATGAGCGCCACTTCATCAGC 151954
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| | | ||||||||||| | ||| || || ||||||||||| ||||| ||||| ||
Sbjct 151953 CACGTCCTTGCCTTCTTTGCTGCCTCGGACGGTATCGTCAACGAGAATCTCGTTGA-GCG 151895
Query 125198 ATTC-TCTCAAGAGTTGACCATTC--CAGAGGTGTCGTGCTTTTACGGATTCCAAATCAT 125254
|||| ||| ||| || || | | |||| ||||| ||||| ||||| |||||
Sbjct 151894 ATTCAGCTC-CGAGGTG--CAGGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCAT 151838
Query 125255 GAT-TGAG 125261
||| ||||
Sbjct 151837 GATGTGAG 151830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741056133867560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |