Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq59 145 1e-30 >seq59 Length=598887 Score = 145 bits (160), Expect = 1e-30 Identities = 181/247 (73%), Gaps = 1/247 (0%) Strand=Plus/Minus Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506 |||||| ||||| || ||||||||||| ||||||||||| || || ||||||||||| || Sbjct 354019 CAGATC-CTTCGTGACAACATCCAAGGCATCACCAAGCCCGCCATTCGTCGTCTGGCCCG 353961 Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566 |||||| || ||||||||| |||| || | |||| || |||| || | || | || Sbjct 353960 TCGTGGCGGTGTCAAGCGTATCTCGGGCCTCATCTACGACGAGACGCGCGGCGTGCTCAA 353901 Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 | |||||||| || | || |||| || | || || || |||||||| || || || Sbjct 353900 GCTCTTCCTCGAGTCGGTCATCCGCGACTCGGTCACGTACACGGAGCACGCGAAGCGCAA 353841 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686 ||| || ||||| | || |||| || || | || || || ||||| | | | ||||| Sbjct 353840 GACGGTGACCTCGCTCGACGTCGTGTACGCGCTCAAGCGCCAGGGCCGCACGCTGTATGG 353781 Query 16687 TTTTGGA 16693 || ||| Sbjct 353780 CTTCGGA 353774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074897364383