Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq130 232 2e-55 >seq130 Length=202609 Score = 232 bits (256), Expect = 2e-55 Identities = 579/865 (67%), Gaps = 16/865 (2%) Strand=Plus/Plus Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG 363513 || ||||| ||| | |||||||||||| | ||||| || || || | || ||| Sbjct 60179 CCTCAGCACATGCTCATGCGTGTTGCTGTCGGTATTCACGGCAATGACATCGACAAGGCG 60238 Query 363514 ATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCACGCCAACAATGT 363571 ||||| ||||| || ||| | || | ||| ||||| || ||| |||| || | | Sbjct 60239 ATTGAGACATACAA-CTTG-ATGTCGGAGAAGTACTTCACCCATGCCTCGCCGACGCTCT 60296 Query 363572 ACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACG 363631 |||||| || || | || || || ||||| || ||||| || | | |||||||||| Sbjct 60297 TCAATGCCGGCACACCCAACCCGCAAATGTCGTCATGCTTCCTCGTCACCATGAAGGACG 60356 Query 363632 ATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAG 363691 | ||||||||||| |||| ||||| || |||| || || | || ||||| || | Sbjct 60357 ACTCCATCGAGGGCATCTACGACACCCTCAAGACCTGCGCCATGATCAGCAAGACAGCCG 60416 Query 363692 GCGGAATTGGTGTATCGATCCACAATGTTCGTG-CACAGAA-CAGTTACATTCGCGGCAC 363749 | || || ||| | |||||| |||||| ||| | || |||||| ||| || Sbjct 60417 GTGGCATCGGTCTCAACATCCACTGCATTCGTGGCACCGGTTCA--TACATTGCCGGTAC 60474 Query 363750 AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTA 363809 || ||| || || | || |||||||| || || | |||| || || ||||| Sbjct 60475 CAACGGTGTCTCCAACGGCATCGTGCCCATGCTCCGAGTCTACAACAACACCGCAAGGTA 60534 Query 363810 CGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCA 363869 |||||||| ||||| ||||| || || ||||| || || ||||||| || Sbjct 60535 TGTCGACCAAGGTGGCAACAAGCGGCCCGGTGCCTTTGCCATCTACATCGAGCCCTGGCA 60594 Query 363870 TGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGC 363929 | || | |||||||| || || ||||| || ||| || || || || | || || Sbjct 60595 CTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCATGGCAAGGAAGAGGTCCGCGC 60654 Query 363930 ACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGG 363989 ||||| || ||||| || || ||| | | |||| || |||||||| || ||| ||| Sbjct 60655 CCGTGAGCTCTTCTACGCTCTCTGGATCCCGGACCTGTTCATGAAGCGAGTCGAG-CAGA 60713 Query 363990 TAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTG 364048 | | ||||| || | ||||| |||||| || || ||| |||| || | || | Sbjct 60714 ACGGCGAGTGGTCTCTTATGTGCCCCGCCGAATGCCCCGGCCTTGCCGACGTCTATGGCG 60773 Query 364049 ACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTC 364108 | || | | ||||| ||| | ||||| || ||||| ||| || || | Sbjct 60774 AGGAGTTCGAGGCTCTGTACCACAAGTACGAGCGCGAGGGCCGGGCCCGCCGCACGGTCA 60833 Query 364109 CCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATA 364168 || |||||||| |||| || ||| | || | |||| ||||| || | || | | Sbjct 60834 AGGCCCAGAAGCTCTGGTACGCTATCCTCGAGGCTCAGACGGAGACTGGCAACCCATTCA 60893 Query 364169 TGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGC 364228 || | ||||| || | |||||||||||| |||||| || |||| || || | ||| Sbjct 60894 TGCTCTACAAGGACGCTGCCAACCGCAAGTCGAACCAGAAGAACCTCGGCACCA-TCA-- 60950 Query 364229 AGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTAT 364285 || || ||||| || || ||||| ||||| |||| || || || ||| ||||| | Sbjct 60951 AGTGCTCGAACCTCTGCACGGAGATCATTGAGTACAGTGCCCCTGATGAGGTCGCCGTCT 61010 Query 364286 GTAACCTTGCGTCGATCGCGCTTCC 364310 | ||||| || ||||||||||| Sbjct 61011 GCAACCTGGCCAGTATCGCGCTTCC 61035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303348072558842