Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq130 152 5e-32 seq206 136 4e-27 seq125 123 2e-23 seq59 118 1e-21 seq41 95.1 1e-14 seq146 86.0 6e-12 >seq130 Length=202609 Score = 152 bits (168), Expect = 5e-32 Identities = 965/1516 (64%), Gaps = 61/1516 (4%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| ||||||||||| | |||||| || || | ||| |||| | || Sbjct 61608 TTGACCACCTGGAACTCGCCGGCGAGCACACGGCGGGTGTAGAGGTTGCTCGTGTACGGC 61549 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| ||| ||||| ||| || | || || ||||| || | | Sbjct 61548 TCAAAGCACTCGTTGAAGCCGAGGATCTGACTCGTAGACGCCGTCGGCATCGGTGCGAGC 61489 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || || ||||| ||||| || || | ||| ||| |||| ||||| Sbjct 61488 AGAAGCGAGTTTCGCAGACCGTGGGTCGCAATCTTGCGCTTGAGCTCGGCCCAGTCCCAC 61429 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || || | ||| | || |||| | ||||||||| | ||||| |||||| |||||| Sbjct 61428 AGGGAGCTGGGCGTGACACCCCAGAGGTCGTACTGGAGCTCGCCCTGGCTGGCTGGGCTG 61369 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGC-CTCCAGA 145354 || | | | ||| | ||||| | || || | ||||| || || ||| || Sbjct 61368 CCCTCGTACGTCTCGTA--CGGGCCAAGCTCCTTTGCAATCTCGC-ACGAGCGCTCGAGG 61312 Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414 ||| || || || |||||| ||||| |||||||| | | || || ||| ||| Sbjct 61311 GCGGCGTGGTAGATGGTCTCGAAGATTTGAATGTTGAGCCTCTTGGCCTCGGGGCTGTCG 61252 Query 145415 TACGGCAT-GCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473 | ||| | || || | | || || ||||| || || | | || | ||||||||| Sbjct 61251 -AAGGCGTAGCCCATGATCATGAATGCGTCGGCAAGACCGTTGACACCAATGCCGATGGG 61193 Query 145474 CCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATA-TCGATTACGGTCGA 145529 || || |||||| | || | || |||| | ||| || | | | || ||||| Sbjct 61192 ACGGTGGCGCATGTTCGACTTCTTGGC---CTCGGGCACAGGGTAGTAGTTGAC-GTCGA 61137 Query 145530 TAATTTTATTCAAGTTTCGCAC-TACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCA 145588 | || || |||||| || |||| || ||||| |||| | ||| ||| | |||||| Sbjct 61136 TGATCTTGTTCAAG-TTGGCACACACGACCTTGGTAACCTCGTGCAGCTTCTTAAAGTCG 61078 Query 145589 AACCGAGCCTCGTCAACGACC-----ACACAGCT--AT-----TG---ACGGCGATCGAC 145633 || ||| | || || | | | ||| || || | ||||| Sbjct 61077 TAC--GTCCTTG-CACCGGTCTCGGGATCCGGCTTGATGTAGGTGGGAAGCGCGATACTG 61021 Query 145634 GCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAA 145693 |||| || || || || ||| || | | | ||||| | | |||||| | ||| | Sbjct 61020 GCCAGGTTGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATGATCTCCGTGCAGAGG 60961 Query 145694 TTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTG 145753 || || |||||||| || || || | ||| || || | |||| ||||||||| Sbjct 60960 TTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 60901 Query 145754 TAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCA-AG-T 145811 ||||||||| | || |||||||||| ||| | ||| | ||| | || || || | Sbjct 60900 TAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGAT--AGCGTACCAGAGCT 60843 Query 145812 CCTGCGCACGCACC-TGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCC 145870 ||| || ||| ||| || || |||||||| ||||| || ||| || || Sbjct 60842 TCTGGGCCTTGACCGTGCGGC-GGGCCCGGCCCTCGCGCTCGTACTTGTGGTACAGAGCC 60784 Query 145871 TCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGAC 145930 || ||| | || ||| |||| |||||||| || | | ||| ||||| || ||| Sbjct 60783 TCGAACTCCTCGCCATAGACGTCGGCAAGGCCGGGGCATTCGGCGGGGCACATAAGAGAC 60724 Query 145931 CATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATC 145990 || ||||||| | ||| |||| ||| |||| || || | ||| || ||||| | Sbjct 60723 CACTCGCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATCCAGAGAGCGTAGAAG 60664 Query 145991 AAGTCGCGCGCTTTGCAATCCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACT 146046 | || || || || |||| | ||||| ||| || | | || | ||| Sbjct 60663 AGCTCACGGGC---GCGGACCTCTTCCTTGCCATGGTTCTTGC-GGAGGTCGAGGA-ACT 60609 Query 146047 -ATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGC 146102 | ||| ||||| |||||| || || || |||| ||| | ||| || || |||| Sbjct 60608 CAAAGACGTCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGCCGCTTGTTGC 60549 Query 146103 CACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGC 146162 |||| ||||| || | | | | ||||||| |||| || | ||||||| ||| |||| Sbjct 60548 CACCTTGGTCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGCACGATGCCGT 60489 Query 146163 TGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCA 146222 ||| || ||||| ||| | || | ||| | || | ||| || | || | Sbjct 60488 TGGAGACACCGTTGGTACCGGCAATGTATGAACCGGTGCCACGAATGCAGTGGATGTTGA 60429 Query 146223 CGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGC 146282 |||| || ||| | |||| || ||||||| ||| || |||||||||| Sbjct 60428 GACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATGC 60369 Query 146283 CGTCAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG 146340 | || ||| ||| |||| ||| || || ||||| || |||| |||| | || Sbjct 60368 CCTCGATGGAGTCGTCCTTC--ATGGTGACGAGGAAGCATGACGACATTTGCGGGTTGGG 60311 Query 146341 CGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCC 146399 || || || ||| | |||||| || || || || | || || | ||||| Sbjct 60310 TGTGCCGGCATTGAAGAGCGTCGGCGAGGCATGGGTGAAGTACTTCTCCG-ACATCAAGT 60252 Query 146400 GATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGA 146459 || || || || || | | ||||| | ||| ||||| || | ||| || ||||||| Sbjct 60251 TGTATGTCTCAATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAGCAACACGCATGA 60192 Query 146460 GCATGTGTTGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCA 146519 ||||||| || |||| ||| ||||| | || ||| | | || || | ||| | Sbjct 60191 GCATGTGCTGAGGCCTCTCGGCCACCTTGCCGTTGATCCTGAGCAGGTACGAGCGCTCGA 60132 Query 146520 GGGTTTTGTATCCGAA 146535 |||| ||| ||||||| Sbjct 60131 GGGTCTTGAATCCGAA 60116 >seq206 Length=170121 Score = 136 bits (150), Expect = 4e-27 Identities = 297/437 (68%), Gaps = 11/437 (3%) Strand=Plus/Minus Query 46142 CGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA 46201 |||| ||||| ||||| | || |||||||| || |||||| |||| || || ||| Sbjct 151619 CGACGTTCGCGGAGCGCCTCGTTGCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCCGGCT 151560 Query 46202 GTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGC 46260 || || |||| || | |||| || | || | | ||||||||||| || || | Sbjct 151559 CCTTCGCGTCCATTTTCTGGCTCAAGAAGCGCGGTC-TGATGCCCGGCCTCACCTTCTCC 151501 Query 46261 AACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAAC 46320 ||||||||||| || ||||||||| |||| || |||||||| || ||| || | | Sbjct 151500 AACGAGCTGATCAGCCGAGACGAGGGCTTGCACACCGACTTTGCCTGCCTC--CTGTT-C 151444 Query 46321 ACTCGCGTGCACGACAAGCTTGCGCCC---GACACCGTGCTGAGCATGTTCAAGGAGGCG 46377 | | | | | || |||| | | | ||| ||| || |||| ||| ||||| Sbjct 151443 AGCCACCTCC--GA-AAGCGGCCCCACCCGGACGTCGTCCTCCGCATCATCACCGAGGCT 151387 Query 46378 GTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC 46437 ||| |||| ||| ||| || | || | ||| || |||| | || | ||||||||| Sbjct 151386 GTGACCATCGAGCAGGCCTTCCTCACCGACGCGCTCCCCGTCTCGCTCATCGGCATGAAC 151327 Query 46438 GCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCAC 46497 | | | ||| || | ||||||||||| || || ||||| |||||||| ||| | Sbjct 151326 TCGCGGCTCATGAGCCAGTACATCGAGTTCGTTGCCGACCGCCTGCTCGTTTCGCTCGGC 151267 Query 46498 CAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557 | ||||| | ||||| |||| || || || |||||| | |||||||| || || Sbjct 151266 AACGACAAGCACTACAACGCGAGCAACCCGTTCGACTTTATGGAGAACATCTCTTTGCAG 151207 Query 46558 GGCAAAACTAATTTTTT 46574 ||||| || || || || Sbjct 151206 GGCAAGACGAACTTCTT 151190 >seq125 Length=635640 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 131004 TGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC 131063 || ||| ||||| | || || || | ||| | ||| |||||||| || |||||||| || Sbjct 378616 TGCGCCGCCGCGGAGCCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 378557 Query 131064 GCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGG 131123 | || |||||| ||| || ||||||||||| || |||| | |||||||||||| || Sbjct 378556 GGCCAAGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGG 378497 Query 131124 AGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTC 131183 ||||| || || ||||| ||| || ||||| | || | || ||| |||||| Sbjct 378496 CGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCAATGGTGTCGCCGGACTC 378437 Query 131184 GATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || |||| ||| | || || || || || || || || || |||||||| Sbjct 378436 GACCTCGAGGGTGATCGTCTTGCCTGTGAGCGTCTTGACAAAGATCTGCAT 378386 >seq59 Length=598887 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | ||| | |||||||||||| || |||||||| || Sbjct 72994 CCACCACGCAGGCGAAGCACAAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCA 73053 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| || |||| | || |||||||| || ||| Sbjct 73054 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGTTGCTGGTCAGGCGGG 73113 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || |||||| | Sbjct 73114 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCACCGGACTCCACC 73173 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | || || || || || || || ||||| ||||||||| Sbjct 73174 TCGAGGGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 73221 >seq41 Length=375347 Score = 95.1 bits (104), Expect = 1e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 |||||||||||| || |||||||| ||| || ||||| |||||| ||||||||||| Sbjct 19626 GGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGTGTGCGGCCGTCCTCAAGCTGCTTGCC 19567 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 ||| |||| | ||||||||||| || ||||| || || ||||| Sbjct 19566 GGCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 19522 >seq146 Length=265622 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | || | || |||||||| || |||||||| || Sbjct 40226 CCACCGCGGAGGCGAAGGACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCG 40285 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | || |||||||| || || Sbjct 40286 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGTCGTTGCTGGTCTGGCGGA 40345 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || ||||||| Sbjct 40346 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCACCAGACTCGACC 40405 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 |||| ||||| ||| || || || || || || || Sbjct 40406 TCGAGGGTAATGGTCTTGCCAGTCAGGGTCTTGAC 40440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010847047040