Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq125 87.8 2e-12 seq59 87.8 2e-12 >seq125 Length=635640 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 24994 GAACAA--TGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGA 25051 |||||| |||| || ||||| ||||| | || || || | ||||| |||| || || Sbjct 378379 GAACAAGATGCAGATCTTTGTCAAGACGCTCACAGGCAAGACGATCACCCTCGAGGTCGA 378438 Query 25052 GTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 ||| ||||| || || | ||| || ||| ||||| || || || || || Sbjct 378439 GTCCGGCGACACCATTGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCGCC 378498 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 ||||| ||||| | || ||||||||||| || | ||||| | ||||| ||| ||| Sbjct 378499 AGACCAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAAGACGGCCGCACCTTGGCCGA 378558 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 ||||| || || || || ||||| || ||| | || || |||| Sbjct 378559 CTACAACATCCAGAAGGAGTCCACCCTCCATCTCGTCCTCCGGCT 378603 >seq59 Length=598887 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | ||||| |||| |||||||| | Sbjct 73220 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCCGGT 73161 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || || || ||||||| Sbjct 73160 GACACCATCGA--CAATGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACC 73103 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || || | || ||||||||||| || | || || | |||||| | | || |||| Sbjct 73102 AGCAACGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTTGCGGACTACA 73043 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || || || || || || || ||| | ||||| Sbjct 73042 ACATCCAGAAGGAGTCGACCCTCCATCTTGTGCT 73009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326251927765