Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq206 98.7 2e-15 seq150 93.3 9e-14 >seq206 Length=170121 Score = 98.7 bits (108), Expect = 2e-15 Identities = 380/582 (65%), Gaps = 15/582 (3%) Strand=Plus/Plus Query 251566 AAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCA 251625 ||||| || | |||||||| || |||||| |||||| |||||||| ||||| | || Sbjct 151190 AAGAAGTTCGTCTTGCCCTGCAAAGAGATGTTCTCCATAAAGTCGAACGGGTTGCTCGCG 151249 Query 251626 TTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATAC 251685 ||||| |||||| | ||| || | |||| | |||||| || || ||||| | ||| Sbjct 151250 TTGTAGTGCTTGTCGTTGCCGAGCGAAACGAGCAGGCGGTCGGCAACGAACTCGATGTAC 151309 Query 251686 TGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGCCTCACAGATGAA 251744 || | ||| || ||||||||||| || | ||| | || | || || || ||| Sbjct 151310 TGGCTCATGAGCCGCGAGTTCATGCCGATGA-GCGAGACGGGGAGCGCGTCGGTGAGGAA 151368 Query 251745 TTCCTTTTCGTTGGCAACTGCCTCCTCCACAAT--TGCCTTC-ACCTGTGCCAGAGACAG 251801 ||| ||| ||| || ||||| | || | | || | | | | | | Sbjct 151369 GGCCTGCTCGATGGTCACAGCCTCGGTGATGATGCGGAGGACGACGTCCGGGTGGGGCCG 151428 Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861 || ||| || | | ||||||| | |||| | ||||| |||||||| || Sbjct 151429 CT--TTC-GGAGGTGGCTGAACAGGAGGCAGGCAAAGTCGGTGTGCAAGCCCTCGTCTCG 151485 Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921 ||||| | ||||||||| | ||||| ||||||| || || ||| |||||||||| Sbjct 151486 GCTGATCAGCTCGTTGGAGAAGGTGAGGCCGGGCATCAGACCGCGCTTCTTGAGCCAGAA 151545 Query 251922 GATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGC 251980 || | ||| ||||| || ||||| | | |||||||| | | ||||| |||| Sbjct 151546 AATGGACGC-GAAGGAGCCGGAGAAGAAGATGCCCTCGACGGCAGCAAAGGCAACGAGGC 151604 Query 251981 GCTCAGCAAACGACTTGTCCTGCGAC-AAGA-ACTTC--TGTGCCCATGCTGCCTTCTTT 252036 |||| || |||| | |||| | | | ||| | || | ||||| | ||||||| Sbjct 151605 GCTCCGCGAACGTCGAGTCC-GTGTCGGAGATCCATCGGAGAGCCCAGTCGGCCTTCTGC 151663 Query 252037 CCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCG 252096 || ||||||| || || || || || ||||| | | || | ||| ||| Sbjct 151664 TTGACGACGGGGATGGTCTCAATGGCGTCGAAGAGGTACTCGCGTTGAGCAGGGTCGCGA 151723 Query 252097 ATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 ||| | |||| |||||| |||||| |||| || || ||| Sbjct 151724 ATGTAGGTGTCAATCAGGAGCGAGTACGTCTCTGAGTGAATG 151765 >seq150 Length=639408 Score = 93.3 bits (102), Expect = 9e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 |||||||| || |||| ||||| || || |||| || || || || || ||||| Sbjct 38490 GGACCCAACGGCTCGGGCAAGTCGACGCTTGTCAAGCTCATGGTCGGTGACACGGAGGCC 38431 Query 280239 ACTGAGGGGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGC 280297 | ||| ||| | | |||||||| || ||| || || | ||||| || |||||||| Sbjct 38430 AA-GAGCGGTGAGGTGTGGAAGCACCCGAACCTGGTCATTGGCTACGTTGCCCAGCACGC 38372 Query 280298 TTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTA 280357 ||||||||||| || | |||||||||| ||| || | | ||||| | ||||||||| Sbjct 38371 GTTCCACCACATTGACCAGCACCTGGACAAGACGCCGCTCGACTACATGCTGTGGCGCTA 38312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027832441008371