Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq130 589 4e-163 seq206 316 4e-81 >seq130 Length=202609 Score = 589 bits (652), Expect = 4e-163 Identities = 1272/1873 (68%), Gaps = 57/1873 (3%) Strand=Plus/Minus Query 243741 TGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799 ||||||||| || || | || |||| ||| | ||||||||| |||| |||||||| Sbjct 61946 TGAACTGGATCGCGTTGGCCGCGGGCCG-GGTACGGAGGTAGTACGTGCCCGTCTTGAGA 61888 Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859 || | ||| ||| || ||||||| |||||||| | | ||| | || Sbjct 61887 CCCTTCTTCCACCCGTAGAAGTGCATGCTCGTCAGCTGGCCAAAC--GAG------GGCG 61836 Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGC 243918 || ||| | || |||||| |||| |||| || || | |||| || || || Sbjct 61835 --CTTGCA--GGTGGATGTTGAGACTCTGGGACTGGCACACAAACG-CGCCACGGTCGGC 61781 Query 243919 GGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978 ||||||| ||||| ||||||| || ||||| || |||||||||||| || ||||| Sbjct 61780 GGCCATGTCGATGATCACCTTCTGCGAGATCTCCCACACCGTCTTGTAGAGGGCCTTGAT 61721 Query 243979 GTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG 244038 | ||||||| ||| | ||| || | |||||| ||| | |||| || | Sbjct 61720 CCGGTCGGGGATCCCGGGCACGTTTTGAATCGAGCCACCGTGTGCAATGATGCGGTTCTT 61661 Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCTCC-AGCGCCTCGACCAGGTGCCTGTTCACCA 244097 ||| | |||||||| ||||| || | | ||| | || ||| ||| |||| Sbjct 61660 CATCTGTTCGTTCCATAGGCCTT-GCTCGACGAGCTCACGGAGCAGCCATGGGTTGACCA 61602 Query 244098 CCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGC 244157 |||| ||||| || | ||||| ||||| |||||||||||| || |||||| | || Sbjct 61601 CCTGGAACTCGCCGGCGAGCACACGGCGGGTGTAGAGGTTGCTCGTGTACGGCTCAAAGC 61542 Query 244158 TCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGAC 244217 ||| || ||| || ||||| ||| ||| |||||||| || | | ||| || Sbjct 61541 ACTCGTTGAAGCCGAGGATCTGACTCGTAGACGCCGTCGGCATCGGTGCGAGCAGAAGCG 61482 Query 244218 TGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCG 244277 ||| | || ||||| || || | | |||||||| ||||||||||| | Sbjct 61481 AGTTTCGCAGACCGTGGGTCGCAATCTTGCGCTTGAGCTCGGCCCAGTCCCACAGG---- 61426 Query 244278 AGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGC 244337 ||| | || ||| ||||| | ||| |||| ||| |||| |||| | |||| Sbjct 61425 -GAGCTGGGCG----TGACACCCCAGAGGTCGTACTGGAGCTCGCCCTGGCTGGCTGGGC 61371 Query 244338 TGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCG-TCGAGG 244396 |||||||||| ||| ||| || || || || | || || | || |||||| Sbjct 61370 TGCCCTCGTACGTCTCGTACGGGCCAAGCTCCTTTGCAATCTCGCA-CGAGCGCTCGAGG 61312 Query 244397 GCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCG-GGCCTTGCCGCAGGT 244455 ||||||| |||||||||||||||||| |||| | | | | ||||| | || | Sbjct 61311 GCGGCGTGGTAGATGGTCTCGAAGATTTGAATGTTGA-GCCTCTTGGCCTCGGGGCTGTC 61253 Query 244456 GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGG 244515 ||||| | |||||| |||||||| ||||||| || || | || || ||||||||||| Sbjct 61252 GAAGGCGTAGCCCATGATCATGAATGCGTCGGCAAGACCGTTGACACCAATGCCGATGGG 61193 Query 244516 TCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCAC 244575 | ||| ||| |||| || | |||| |||||||| ||||| ||||| ||||||| | Sbjct 61192 ACGGTGGCGCATGTTCGACTTCTTGGCCTCGGGCACAGGGTAGTAGTTGACGTCGATGAT 61133 Query 244576 CTTGTTGAGGTTG---CGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632 |||||| | |||| | || | || | | || ||| |||| || ||||||||| Sbjct 61132 CTTGTTCAAGTTGGCACACACGACCTTG-GTA--ACCTCGTGCAGCTTCTTAAAGTCGTA 61076 Query 244633 C-TCGTAGGGATCCTCGGCGATGGTGATCCT-CACAAACTCGTTG---AGGGCGACGCTG 244687 | || | | | | | | | ||||| | | | | || || |||| ||| Sbjct 61075 CGTCCTTG-----CACCGGTCTCGGGATCCGGCTTGATGTAGGTGGGAAGCGCGATACTG 61021 Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 ||||||||||||||||| ||||| || | | |||||| | ||||| ||||||||| Sbjct 61020 GCCAGGTTGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATGATCTCCGTGCAGAGG 60961 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 || ||||||||||||||| |||| || || || |||||| |||| ||||||||| Sbjct 60960 TTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 60901 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867 ||||||||||| || || ||||| ||| || |||||| || |||||| | | Sbjct 60900 TAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGATAGCGTACCAGAGCTTC 60841 Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927 ||||||||||| | ||| ||| |||||| |||||| | |||||| |||||| Sbjct 60840 TGGGCCTTGACCGTGCGGCGGGCCCGGCCCTCGCGCTCGTACTTGTGGTACAGAGCCTCG 60781 Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCAC 244987 ||||| ||| |||| ||| | ||||||||||| || |||||||| ||| |||| Sbjct 60780 AACTCCTCGCCATAGACGTCGGCAAGGCCGGGGCATTCGGCGGGGCACATAAGAGACCAC 60721 Query 244988 TCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGG 245047 |||||| | || ||| | || |||||| ||||| ||||||||||| || | |||||| Sbjct 60720 TCGCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATCCAGAGAGCGTAGAAGAGC 60661 Query 245048 TCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACG 245107 || | || | ||| ||| |||| |||||| | || || | || ||||||||| Sbjct 60660 TCACGGGCGCGGACCTCTTCCTTGCCATGGTTCTTGCGGAGGTCGAGGAACTCAAAGACG 60601 Query 245108 TCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGG 245167 || |||||||||||| ||||||| || | ||| ||||||||||||||||| || ||| Sbjct 60600 TCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGCCGCTTGTTGCCACCTTGG 60541 Query 245168 TCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGG 245227 || || ||| || |||| ||| || || | ||||| |||||||| ||| Sbjct 60540 TCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGCACGATGCCGTTGGAGACA 60481 Query 245228 CCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGT 245287 |||||||| || ||||| | || |||| | | | | |||| | || | Sbjct 60480 CCGTTGGTACCGGCAATGTATGAACCGGTGCCACGAATGCAGTGGATGTTGAGACCGATG 60421 Query 245288 CCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATG 245347 || ||||| |||| ||| | ||||||| |||||| |||||| |||||||| ||| Sbjct 60420 CCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATGCCCTCGATG 60361 Query 245348 CTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAG 245407 ||| ||||||| ||| || ||||| || |||| || || ||||| ||| | Sbjct 60360 GAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACATTTGCGGGTTGGGTGTGCCGGCA 60301 Query 245408 TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCT-CGAGAGGAACCCGTACGTCTG 245466 ||||| || || || ||| ||||| ||||| | || ||| | || ||| |||| Sbjct 60300 TTGAAGAGCGTCGGCGAGGCATGGGTGAAGTA-CTTCTCCGACATCAAGTTGTATGTCTC 60242 Query 245467 GAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG 245526 | | |||||||| | |||||| || | || | |||||| ||||||| Sbjct 60241 AATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAGCAACACGCATGAGCATGTGCTG 60182 Query 245527 GGGCGTCTCGATGGGTCCCT--CG--GGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCT 245582 ||| ||||| | || | || | ||| |||||| ||| ||||||||||| |||| Sbjct 60181 AGGCCTCTCG--GCCACCTTGCCGTTGATCC--TGAGCAGGTACGAGCGCTCGAGGGTCT 60126 Query 245583 TGAACCCAAAGTA 245595 |||| || ||||| Sbjct 60125 TGAATCCGAAGTA 60113 >seq206 Length=170121 Score = 316 bits (350), Expect = 4e-81 Identities = 387/518 (75%), Gaps = 15/518 (3%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 || ||| | ||||| ||||| || ||| | ||||| ||||||| |||||||| ||| Sbjct 151698 CTCTTCGACGCCATTGAGACCATCCCCGTCGTCAAGCAGAAGGCCGACTGGGCTCTCCGA 151639 Query 42669 TGGATC---GAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTC 42725 |||||| || | | ||| | ||||||| ||| | || || |||||| | |||||| Sbjct 151638 TGGATCTCCGACA---CGGACTCGACGTTCGCGGAGCGCCTCGTTGCCTTTGCTGCCGTC 151582 Query 42726 GAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC- 42784 ||||||||||||||||| ||| ||||||| ||||| |||||||||||| || | ||| Sbjct 151581 GAGGGCATCTTCTTCTCCGGCTCCTTCGCGTCCATTTTCTGGCTCAAGAAGCGCG-GTCT 151523 Query 42785 GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGA 42844 ||||||||| ||||||||||| ||||| || |||||| | |||||||| |||| | || Sbjct 151522 GATGCCCGGCCTCACCTTCTCCAACGAGCTGATCAGCCGAGACGAGGGCTTGCACACCGA 151463 Query 42845 CTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCG 42904 ||||||||||||||||||| ||||||||| | | |||| ||| |||| Sbjct 151462 CTTTGCCTGCCTCCTGTTC---AGCCACCTCCGAAAGCGGCCCCACCCGGACGTCGTCCT 151406 Query 42905 GGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGT 42964 ||||||||| ||||| ||| |||||| ||| |||||||| | |||| ||||| Sbjct 151405 CCGCATCATCACCGAGGCTGTGACCATCGAGCAGGCCTTCCTCACCGACGCGCTCCCCGT 151346 Query 42965 GTCCCTGGTCGGCATGAAC-CACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023 || || ||||||||||| | || |||||| || |||||||| ||| ||| ||||||| Sbjct 151345 CTCGCTCATCGGCATGAACTCGCG-GCTCATGAGCCAGTACATCGAGTTCGTTGCCGACC 151287 Query 43024 ATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTT 43082 || || || | | | || | | | ||||||| || ||| ||||||||| Sbjct 151286 GCCTGCTCGTTTC-GCTCGGCAACGACAAGCACTACAACGCGAGCAACCCGTTCGACTTT 151228 Query 43083 ATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTT 43120 |||||||||||||| ||| |||||||||| ||||| || Sbjct 151227 ATGGAGAACATCTCTTTGCAGGGCAAGACGAACTTCTT 151190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944335292796560