Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq150 107 4e-18 seq206 87.8 4e-12 >seq150 Length=639408 Score = 107 bits (118), Expect = 4e-18 Identities = 179/256 (70%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 334100 AATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGC 334159 ||||||||| | || | || | | || || |||||||| ||||| || ||||| | Sbjct 39067 AATGAAGTCGAGAATGGAGATCTCACCCTCAGAACCGTCGAGGTCGTGCTCGACGTAC-C 39125 Query 334160 AGTTTTCAAAA-CATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCA 334218 || | || | || | |||||||| || || | ||| || ||| ||||||||||| Sbjct 39126 AGGTGCGAACCTCCTCGGGCGAGGGGAAGCCCTCGACCTGGCCATTCTGAATAGCGCGCA 39185 Query 334219 TCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCA 334278 ||| ||| || || || | ||||| | ||||| ||||||||||||| |||||||| | Sbjct 39186 TCAAAGTCGACTTGCCGGAGCCGTTGCGGCCACAGAGACCGTAGCGGTGGCCACGCTTGA 39245 Query 334279 GATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAAT 334338 || || || |||| || || || || ||||||| || || || |||| ||| | Sbjct 39246 GACGGAGAGTCGCCGTGTTGAGCAGGATCTTGGCACCATAGGCGAGCGAGAATTGACAGT 39305 Query 334339 CACACAGATCCTCACC 334354 || || ||||| || Sbjct 39306 TGCAAAGGTCCTCGCC 39321 >seq206 Length=170121 Score = 87.8 bits (96), Expect = 4e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| || ||||||||||| |||||| | ||||||||||| ||||| ||||||||| | Sbjct 151342 GCTCATCGGCATGAACTCGCGGCTCATGAGCCAGTACATCGAGTTCGTTGCCGACCGCCT 151283 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 || | |||| || | || || |||||| | | ||||| || | ||||||||| Sbjct 151282 GCTCGTTTCGCTCGGCAACGACAAGCACTACAACGCGAGCAACCCGTTCGACTTTATGGA 151223 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTT 243713 | ||| || | || || || || |||||||| Sbjct 151222 GAACATCTCTTTGCAGGGCAAGACGAACTTCTT 151190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875322754850