Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq130 183 4e-41 seq206 89.7 6e-13 >seq130 Length=202609 Score = 183 bits (202), Expect = 4e-41 Identities = 562/855 (66%), Gaps = 13/855 (2%) Strand=Plus/Minus Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 ||||| ||||| ||||| || || || | | |||||| || ||||||| || Sbjct 61035 GGAAGCGCGATACTGGCCAGGTTGCAGACGGCGACCTCATCAGGGGCACTGTACTCAATG 60976 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 || ||||| || | || || | ||| |||||||| | |||||| || || ||||| | Sbjct 60975 ATCTCCGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCGG 60916 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 || || |||||||| |||||| |||| | || |||||||| || | || ||| ||| Sbjct 60915 TTGGCAGCGTCCTTGTAGAGCATGAATGGGTTGCCAGTCTCCGTCTGAGCCTCGAGGATA 60856 Query 114644 GCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 114702 || | ||||| | || | | || | || ||| | ||| || ||||| ||||||||| Sbjct 60855 GCGTACCAGAGCTTCTGGGCCTTG-ACCGTGCGGCGGGCCCGGCCCTCGCGCTCGTACTT 60797 Query 114703 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTAT-CTG 114761 ||| || || || ||||| || || | | || | || || || || || | | Sbjct 60796 GTGGTACAGAGCCTCGAACTCCTCGCCATAGACGTCGGCAAGGCCGGG-GCATTCGGCGG 60738 Query 114762 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCC 114821 |||| | |||||||| | || || ||| || ||||||||||| ||||| ||||||| Sbjct 60737 GGCACATAAGAGACCACTCGCCGTTCTGCTCGACTCGCTTCATGAACAGGTCCGGGATCC 60678 Query 114822 AGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 114881 ||||||| ||||||| || || ||| | ||||| | || || || || | | Sbjct 60677 AGAGAGCGTAGAAGAGCTCACGGGCGCGGACCTCTTCCTTGCCATGGTTCTTGCGGAGGT 60618 Query 114882 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CC 114937 | | || || | || |||| |||||| || || | ||| | || | | ||| || Sbjct 60617 CGAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCGATGTAGATGGCAAAGGCACCGGGCC 60558 Query 114938 TTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGA 114997 | | ||| | |||| |||||||| || ||| || | || || ||||| || Sbjct 60557 GCTTGTTG-CCACCTTGGTCGACATACCTTGCGGTGTTGTTGTAGACTCGGAGCATGGGC 60499 Query 114998 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCA 115057 | ||| || | || || || || || ||| || || | | || || Sbjct 60498 ACGATGCCGTTGGAGACACCGTTGGTACCGGCAATGTATGAACCGGTGCCAC-GAATGCA 60440 Query 115058 -TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 115116 ||||||| | ||| || || || || ||| ||| ||||| | |||| | Sbjct 60439 GTGGATGTTGAGACCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGGTCTTGAGGGT 60380 Query 115117 GCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTG 115176 | ||||||| || ||||| ||||| |||| | | || |||||||| ||||||||| Sbjct 60379 GTCGTAGATGCCCTCGATGGAGTCGTCCTTCATGGTGACGAGGAAGCATGACGACATTTG 60320 Query 115177 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGG 115235 || | ||||| || || |||||||| || || | || ||| |||| ||| | | | Sbjct 60319 CGGGTTGGGTGTGCCGGCATTGAAGAGCGTCGGCGAGGCATGGGTGAA-GTACTTCTCCG 60261 Query 115236 ACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGA 115295 ||||| | ||| ||||| | | | ||||| | ||||||||||||| | | Sbjct 60260 ACATCAAGTTGTATGTCTCAATCGCCTTGTCGATGTCATTGCCGTGAATACCGACAGCAA 60201 Query 115296 CCCGCATAAACATGT 115310 | ||||| | ||||| Sbjct 60200 CACGCATGAGCATGT 60186 >seq206 Length=170121 Score = 89.7 bits (98), Expect = 6e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| | |||||||| ||| ||| || || || |||||| || || Sbjct 151456 GGCAAAGTCGGTGTGCAAGCCCTCGTCTCGGCTGATCAGCTCGTTGGAGAAGGTGAGGCC 151515 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| ||||| |||||||| | ||||||||| | || || || ||||||||||| Sbjct 151516 GGGCATCAGACCGCGCTTCTTGAGCCAGAAAATGGACGCGAAGGAGCCGGAGAAGAAGAT 151575 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 126204 ||||| || || || |||| ||| ||||| || || Sbjct 151576 GCCCTCGACGGCAGCAAAGGCAACGAGGCGCTCCGCGAA 151614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351128449480