Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Salmacisia_20buchloeana_20[genbank_20GCA_5F001990185.1_202017-02-07] 331 sequences; 18,422,451 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq130 352 3e-92 >seq130 Length=202609 Score = 352 bits (390), Expect = 3e-92 Identities = 1124/1721 (65%), Gaps = 48/1721 (3%) Strand=Plus/Plus Query 93722 ATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTT 93781 ||||||| | ||||| || || ||| |||||||| |||| ||| | |||| ||| Sbjct 60111 ATTACTTCGGATTCAAGACCCTCGAGCGCTCGTACCTGCTCAGGATCAACGGCAAGGTGG 60170 Query 93782 CCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGC 93841 ||||| | || || || |||| ||||| || || |||| ||||||||| | ||||| Sbjct 60171 CCGAGAGGCCTCAGCACATGCTCATGCGTGTTGCTGTCGGTATTCACGGCAATGACATCG 60230 Query 93842 CGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGA 93901 || | | | | | || ||| ||| ||| | ||| ||| | |||| Sbjct 60231 ACAAGGCGATTGAGACATACAACTTGATGTCGGAGAAGTACTTCACCCATGCCTCGCCGA 60290 Query 93902 CCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACA 93961 | || ||||| || || || || || || ||||| || || ||||| | || | | Sbjct 60291 CGCTCTTCAATGCCGGCACACCCAACCCGCAAATGTCGTCATGCTTCCTCGTCACCATGA 60350 Query 93962 AGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT-CAAAA 94020 ||| |||||||||| || || | ||||| ||||||| ||| || | ||| ||| | Sbjct 60351 AGGACGACTCCATCGAGGGCATCTACGACACCCTCAAGACCTGCGCCATGATCAGCAAGA 60410 Query 94021 TACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGC 94080 | || || || ||||| ||| ||||| | | |||| || ||||| ||||| | Sbjct 60411 CA-GCCGGTGGCATCGGTCTCAACATCCACTGCATTCGTGGCACCGGTTCATACATTGCC 60469 Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140 |||||||| || |||||||||| |||| || |||||||| |||| ||||||| | || Sbjct 60470 GGTACCAACGGTGTCTCCAACGGCATCGTGCCCATGCTCCGAGTCTACAACAACACCGCA 60529 Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200 | || || ||||| ||||| | | || ||| | || || |||| |||||||| Sbjct 60530 AGGTATGTCGACCAAGGTGGCAACAAGCGGCCCGGTGCCTTTGCCATCTACATCGAGCCC 60589 Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260 |||||| ||||||| | ||| ||||||| || |||||||| ||||| || || Sbjct 60590 TGGCACTCGGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCATGGCAAGGAAGAGGTC 60649 Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320 | ||| | || |||||||||||||||||| | || ||||| || ||||| || |||||| Sbjct 60650 CGCGCCCGTGAGCTCTTCTACGCTCTCTGGATCCCGGACCTGTTCATGAAGCGAGTCGAG 60709 Query 94321 AAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGT 94380 | ||| || ||| |||| | || ||| ||||| ||||| || ||||||| | | Sbjct 60710 CAGAACGGCGAGTGGTCTCTTATGTGCCCCGCCGAATGCCCCGGCCTTGCCGACGTCTAT 60769 Query 94381 GGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCAAGGC---CAGGAA 94436 || | || || | |||| |||| | ||| ||||| ||| | | | Sbjct 60770 GGCGAGGAGTTCGAGGCTCTGTACCACAAGTACG-AGCGCGAGGGCCGGGCCCGCCGCAC 60828 Query 94437 GGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTAC 94496 ||| | | || |||||| ||| | ||| | || | ||| |||||| || | Sbjct 60829 GGTCA---AGGCCCAGAAGCTCTGGTACGCTATCCTCGAGGCTCAGACGGAGACTGGCAA 60885 Query 94497 GCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGT 94556 || | ||| | | ||||||| ||| |||| |||||| |||||| || ||||||| Sbjct 60886 CCCATTCATGCTCTACAAGGACGCTGCCAACCGCAAGTCGAACCAGAAGAACCTCGGCAC 60945 Query 94557 GATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGC 94616 |||||| ||||||| || ||||| ||||| | ||||| | | | || || ||| | || Sbjct 60946 CATCAAGTGCTCGAACCTCTGCACGGAGATCATTGAGTACAGTGCCCCTGATGAGGTCGC 61005 Query 94617 TGTGTGTAACCTGGGCTCCATCAACCTGTCCACTT---TCGTGCGAGATGCCTACACGTC 94673 || || ||||||| | ||| || |||| | || || ||| || | || Sbjct 61006 CGTCTGCAACCTGGCCAGTATCGCGCTTCCCACCTACATCAAGCCGGATCCCGAGACCGG 61065 Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTG----- 94728 | | ||| ||| | || ||| || | || || | | |||| || Sbjct 61066 TGCAAGGACGTACGACTTTAAGAAGC---TGCA---CGAGGTTACCAAGGTCGTGTGTGC 61119 Query 94729 -AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787 ||| |||||| | | |||||| |||| |||||| || || ||||| |||| || || Sbjct 61120 CAACTTGAACAAGATCATCGACGTCAACTACTACCCTGTGCCCGAGGCCAAGAAGTCGAA 61179 Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847 | || || || ||||||||||| || ||| | ||| | || ||||| | |||| || Sbjct 61180 CATGCGCCACCGTCCCATCGGCATTGGTGTCAACGGTCTTGCCGACGCATTCATGATCAT 61239 Query 94848 GCGTCTGC-CCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906 | | || | ||| |||| ||| || | | | || | | || ||||| | || Sbjct 61240 G-GGCTACGCCTTCGACAGCCCCGAGGCCAAGAGGCTCAACATTCAAATCTTCGAGACCA 61298 Query 94907 TTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACG 94966 | || ||| ||| | | | || | | | || | ||| || || ||| Sbjct 61299 TCTACCACGCCGCCCTCGAGCGCTCGTGCGAGATTGC---AAAGGAGCTTGGCCCGTACG 61355 Query 94967 AATCGTTCCGCGGATCGCCCTTGGA-ACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTG 95025 | || | || || |||| | |||||| | |||| ||||||||||||||| Sbjct 61356 AGACG-TACGAGGGCAGCCCAGCCAGCCAGGGCGAGCTCCAGTACGACCTCTGGGGTGTC 61414 Query 95026 AAGCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCTGATGTTATCAAACACGGTG 95083 | |||| |||| ||||||| ||||| | |||| | || | |||||| Sbjct 61415 ACGCCCAGCTCCCTGTGGGACTGGGCCGAGCTC-AAGCGC-AAGATTGCGACCCACGGTC 61472 Query 95084 TGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCA 95143 || |||| |||| || | || || ||||| ||||| || ||| |||||||| ||| Sbjct 61473 TGCGAAACTCGCTTCTGCTCGCACCGATGCCGACGGCGTCTACGAGTCAGATCCTCGGCT 61532 Query 95144 ACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGG 95203 |||||||| || || || | ||| |||| | |||| | | || ||||||||||| | Sbjct 61533 TCAACGAGTGCTTTGAGCCGTACACGAGCAACCTCTACACCCGCCGTGTGCTCGCCGGCG 61592 Query 95204 AATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGTGGGG 95261 | |||| || ||||| || || || || || |||| | || | ||| Sbjct 61593 AGTTCCAGGTGGTCAACCCATGGCTGCTCCGTGAGCT--CGTCGAGCAAGGCCTATGGAA 61650 Query 95262 TGACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGC 95317 || || | ||||||| | ||| || || ||||| | || ||| | || Sbjct 61651 CGAACAGATGAAGAACCGCATCATTGC-ACACG---GTGGCTCGATTCAAAACGTGCCCG 61706 Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGA 95377 || || || |||||||| ||||||||||| |||||||||||| ||||| |||| Sbjct 61707 GGATCCCCGACCGGATCAAGGCCCTCTACAAGACGGTGTGGGAGATCTCGCAGAAGGTGA 61766 Query 95378 TACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 | ||||| || |||| ||| || | || | |||||| Sbjct 61767 TCATCGACATGGCCGCCGACCGTGGCGCGTTTGTGTGCCAG 61807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721153082760